Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca6g01734 ATGTTGTACTTGTTATCAGATCTTGAGCATGTTGTCAGCCCAGTCTCTGTTGCACACTTCTCACAGTACAAGCTGACTATGTTACTACTCAAGCGACTTGAAAATCTAGGCTTTCAAATATGTGCATCTGAAAGCTCAGAAGGAAATGAGCAGTCTTGTGATAAGAAAATAATGATGGGTCATGAGTGTGTATCCATTGATGCCAGCAATGACTTTGTAACTGTAACTGCATCTTCTATCAATAATGGGAAGCGTGTAGAACAGAATATCCATTGTAACATCCTTATTGGTACAGATGGAGCAGGAAGTACTGTGAGAAAGCTTGTAGGAATAGATATGAGAGGTGAGGAAGACTTGCAAAAGCTTGTCAGTGTCCATTTCTTTAGCAAAGGCCTGGGGCAGTTTTTGCTTAAGGAGAATCCTGGTATGCTTTTCTTTATCTTCAATACTGAAGCAATTGGGGTCCTCGTTGCTCATGATCTCAGGGAAGGGGAGTTTGTATTACAGATACCCTTTTATCCACCTCAGCAAACAATTGAGGATTTCAGTCGAAAGGCATGTAAGAAGTTAATCAACAAACTTGTTGGTCGAGAGTTTAGAGATGTGGATGTAATTGATATAAAGCCATGGGTTATGCATGCTGAAGTTGCAGAGAGGTTTATATGTTGCGGCAACCGAATATTACTTGCCGGTGATGCTGCTCATCGATTTCCTCCTGCTGGTGGATTTGGAATGAATACTGGCATTCAGGATGCCCATAATCTTGCCTGGAAAATAGCTTCTGTCATCAAGGGTACTGCCCCATCTTCATTGCTAAATACCTATGAAATGGAACGTAGACCGATTTCTGTATTCAATACAAGATTAAGTCTAGAAAACTATAGAACTGCCATGTCTGTTCCTGCTGCACTTGGTCTCAGTCCAACTGTTGCAAACACAGTACATCGATTTATTGTTAATGGGATTGGTTCCATCTTACCATCCGGATTGCAGAAGGTAGCTTTGGATGGAATTTTTGCTATGGGTCGTGCACAGCTTTCAGAATCTATTTTAAATGAGAGCAACCCTCTTGGATCTTCAAGGTTGGCTAAGCTAAGAGATATATTTGAAGAAGGAAAAAGCCTTCAACTTCAGTTCCCTGCTGAAGATCTCAGTTTTAGGTACCTACAAGGAGCAATTATGCCAGAGAGTAATGATGTTGAGAGTCCTGAACAAGTACCTACAGGTCGTCGGAGGGACTACATCCCTTCTGCTCAACCAGGATCAAGACTGCCTCATATGTTTGTGAGGGTAAATCCATTGAGTGAGGAGACTGTTTCTACTCTTGATCTTGTGTCTGGAGATAAAGTCGAGTTCATTCTCATCATAGCACCTGTGAAGGAATCTTATCACCTTGCCCGTGAAGCATTCAAGGTGGCTGAGGAACGACAAGTTTCTCTCAAGGTGTGTGTTTTTTGGTCTACTGATTCTGTTGAAGGGCTTGATAAAGGAAGTATAGCAGCATTATCACCTTGGAAGAATTATGTAGACGTTGTTGAAGTTCAGTCAACAACTTCAAATTGGTGGGATATGTGTAACATGACAAACAGAGGTGCTATTTTAGTTAGACCTGATGAACATATTGCCTGGAGGACAATATCAGGACTTGCCGGGGATCCTAGAGTGGAAATGCATAGGGTCTTTTCTGCTATACTGGGAGCACACTAA 1707 0.4165 MLYLLSDLEHVVSPVSVAHFSQYKLTMLLLKRLENLGFQICASESSEGNEQSCDKKIMMGHECVSIDASNDFVTVTASSINNGKRVEQNIHCNILIGTDGAGSTVRKLVGIDMRGEEDLQKLVSVHFFSKGLGQFLLKENPGMLFFIFNTEAIGVLVAHDLREGEFVLQIPFYPPQQTIEDFSRKACKKLINKLVGREFRDVDVIDIKPWVMHAEVAERFICCGNRILLAGDAAHRFPPAGGFGMNTGIQDAHNLAWKIASVIKGTAPSSLLNTYEMERRPISVFNTRLSLENYRTAMSVPAALGLSPTVANTVHRFIVNGIGSILPSGLQKVALDGIFAMGRAQLSESILNESNPLGSSRLAKLRDIFEEGKSLQLQFPAEDLSFRYLQGAIMPESNDVESPEQVPTGRRRDYIPSAQPGSRLPHMFVRVNPLSEETVSTLDLVSGDKVEFILIIAPVKESYHLAREAFKVAEERQVSLKVCVFWSTDSVEGLDKGSIAALSPWKNYVDVVEVQSTTSNWWDMCNMTNRGAILVRPDEHIAWRTISGLAGDPRVEMHRVFSAILGAH. 569
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca6g01734 568 PANTHER TRK SYSTEM POTASSIUM UPTAKE PROTEIN 7 564 - -
Seca6g01734 568 Gene3D - 381 567 - -
Seca6g01734 568 Pfam FAD binding domain 55 283 IPR002938 GO:0071949
Seca6g01734 568 Gene3D - 217 318 IPR036188 -
Seca6g01734 568 SUPERFAMILY FAD/NAD(P)-binding domain 55 303 IPR036188 -
Seca6g01734 568 PRINTS Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 257 275 - -
Seca6g01734 568 PRINTS Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 224 239 - -
Seca6g01734 568 PRINTS Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 91 106 - -
Seca6g01734 568 PRINTS Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 275 291 - -
Seca6g01734 568 PRINTS Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 239 255 - -
Seca6g01734 568 Gene3D - 82 216 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca6g01734 Seca-Chr6 72031395 72039097 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca6g01734 - - gmx:100794253 1015.37