Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca6g01727 ATGATTTTGAATTGTTTGTTTATTGCAGGCATACCAGGAGATGGTAGATGTCTGTTTAGATCTGTGGTTTATGGTGCCTGCCTCAGAACAGGGGTGCCACCTCCAAGTCTCAGCAGGCAAAAGGAACTTGCAGATGAGCTCAGAGCCAAAGTAGTTGTAGATGAATTCATTAAGAGAAGGGCAGATACAGAGTGGTATGTTAGTTATATCTTGAAGGAGATAGCTCTGTTTACAGATTTACAGTGA 246 0.4187 MILNCLFIAGIPGDGRCLFRSVVYGACLRTGVPPPSLSRQKELADELRAKVVVDEFIKRRADTEWYVSYILKEIALFTDLQ. 82
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca6g01727 81 Gene3D - 3 78 - -
Seca6g01727 81 Pfam OTU-like cysteine protease 12 68 IPR003323 -
Seca6g01727 81 ProSiteProfiles OTU domain profile. 6 81 IPR003323 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca6g01727 Seca-Chr6 71871790 71874140 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca6g01727 - K18342 gmx:100783271 112.079
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Seca6g01727 6 71871790 71874140 Seca6g01727 6 71871790 71874140 ECH