Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca6g01703 ATGTCGCTGGCAGCATCTTTCTCCTCCATCCTCCGCCACCGCACGGTGGCTTCCGCCGCCCCTCTCCTTCTCCGGCGGTTCCGGTGCCTCCCAATTGTCGCCAGGCAACAAAACCCTAAACAAGAAGCCCCCAACAAGAATCTCCTGAAAGCGAAGCACACCTTGAAGGAGTTCTCCTCTCTCGCTCCCGTCCTTTCCCACGAAGACAACCCTCCTCTCTCCGAATCCCAGGCCGTCGGCGTCGTCGCTGCTTCTCAGGCCAACTTCATGCGCGTCATCGTCCCCGAAGAACCTTCTGGAAGCTTCCAAGGGGTCGAGCTGTTGTGCGTGGTGAGGGCGTTGCTGAAGAAGATAAAGCGCAGGGTGATGGTTGGAGACAAGGTTCTCGTAGGTTCCATCGATTGGGTGGATCGCAGGGGCATGATTGAGAACGTTTTCCAGCGAAATTCCGAGATTCTGGACCCTCCCGTCGCCAACGTCGACCATTTACTCGTCCTTTTCTCGCTCGAGCAACCCAAGCCTGAGCCCTTTACGCTCACCAGGTTTTTGGTGGAAGCTGAATCCACTGGGATCCCTCTCACGCTAGCACTCAACAAGATGGAGCTTGTGGATAAAGAGGTTGACACTGTTTGCATAGACACAATGGCATTGTGGTTATGA 660 0.5545 MSLAASFSSILRHRTVASAAPLLLRRFRCLPIVARQQNPKQEAPNKNLLKAKHTLKEFSSLAPVLSHEDNPPLSESQAVGVVAASQANFMRVIVPEEPSGSFQGVELLCVVRALLKKIKRRVMVGDKVLVGSIDWVDRRGMIENVFQRNSEILDPPVANVDHLLVLFSLEQPKPEPFTLTRFLVEAESTGIPLTLALNKMELVDKEVDTVCIDTMALWL. 220
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca6g01703 219 Gene3D - 73 145 IPR012340 -
Seca6g01703 219 Gene3D - 146 217 IPR027417 -
Seca6g01703 219 PANTHER SMALL RIBOSOMAL SUBUNIT BIOGENESIS GTPASE RSGA 49 209 IPR004881 GO:0003924|GO:0005525
Seca6g01703 219 Pfam RsgA GTPase 145 207 IPR010914 GO:0003924|GO:0005525
Seca6g01703 219 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 152 210 IPR027417 -
Seca6g01703 219 SUPERFAMILY Nucleic acid-binding proteins 78 148 IPR012340 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca6g01703 Seca-Chr6 71594700 71595359 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca6g01703 K06949 - gmx:100796145 323.939
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Seca6g01703 6 71594700 71595359 Seca6g01703 6 71594700 71595359 ECH