Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca6g01701 ATGGACTGGCAAGGGCAAAAGCTAGCAGAGCAGCTAAAGCAGATAATGCTGCTTGCATTTGCTGTGATTGCATTTGCAACAGGATATTTTATGGCTTCTTTCCAAATGATGACCCTCATATATGCTGCTGGTGTGGTTCTCACTACATTGGTGACTGTCCCTAATTGGCCTTTTTTCAACCATCATCCTCTCAAGTGGTTGGATCCAAGTGAGGTAGAAAAGCACCCGAAGCCCCAACCATCTGTGAATGTAAATTCAAAGAAGAAACCTGTTAAGAAATAG 282 0.4291 MDWQGQKLAEQLKQIMLLAFAVIAFATGYFMASFQMMTLIYAAGVVLTTLVTVPNWPFFNHHPLKWLDPSEVEKHPKPQPSVNVNSKKKPVKK. 94
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca6g01701 93 MobiDBLite consensus disorder prediction 70 93 - -
Seca6g01701 93 Pfam Microsomal signal peptidase 12 kDa subunit (SPC12) 1 70 IPR009542 GO:0005787|GO:0006465|GO:0016020
Seca6g01701 93 PANTHER MICROSOMAL SIGNAL PEPTIDASE 12 KDA SUBUNIT 1 89 IPR009542 GO:0005787|GO:0006465|GO:0016020
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca6g01701 Seca-Chr6 71577865 71578146 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca6g01701 K12946 - gmx:100777545 147.132