Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca6g01688 ATGGAGTTTTCTCAAGACGACTTTGATCGGTTACTGTTATTCGAGCATACGCGAAAGACAGCTGAAGCAAACCACGCAGAAAACCCTCTTGACGCTGATAATCTGACCAAGTGGGGTGGAGCTTTGATCGAGTTGTCGGCATTTCAAAATCCCAGGGATTCCAAGAAGATGATTGATGATGCCCTTTCAAAGTTGGAGGAGGCTTTACGAATCAGTCCAACAAAGCATGACACTCTTTGGTGCTTGGGAAATGCCCACACATCTTATGCATTTCTAACTCCTGATATCAGTGAGGCAAGGGGTTCTTTTGACAAGGCACATGAGTATTTCCAGAAAGCTGTAGATGAGGATCCTGAGAATGAGCTCTATAGAAAGTCCTTAGAAGTTGCTGTTAAGGCCCCAGAACTACACATGGAGATCCACAAAAATGGGCTTGGTCAGATGAGTTTGGGGGGATCCTCTGCTTCTTCAAAAGAAAAGGTTGGATTAACTGAAATTGAATCTAAAAAGCAGAGGAGCAATGACTTAAAGTATGACATATTTGGATGGATTATTCTTGCAGTAGGTATAGTAGCCTGGGTGGGAATGGCCAAATCTCAGATTCCACCACCACCTCCAAGATAA 624 0.4359 MEFSQDDFDRLLLFEHTRKTAEANHAENPLDADNLTKWGGALIELSAFQNPRDSKKMIDDALSKLEEALRISPTKHDTLWCLGNAHTSYAFLTPDISEARGSFDKAHEYFQKAVDEDPENELYRKSLEVAVKAPELHMEIHKNGLGQMSLGGSSASSKEKVGLTEIESKKQRSNDLKYDIFGWIILAVGIVAWVGMAKSQIPPPPPR. 208
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca6g01688 207 Gene3D Tetratricopeptide repeat domain 1 150 IPR011990 GO:0005515
Seca6g01688 207 ProSiteProfiles TPR repeat profile. 87 120 IPR019734 GO:0005515
Seca6g01688 207 SUPERFAMILY TPR-like 25 128 IPR011990 GO:0005515
Seca6g01688 207 Pfam Plant specific mitochondrial import receptor subunit TOM20 8 198 - -
Seca6g01688 207 PANTHER MITOCHONDRIAL IMPORT RECEPTOR SUBUNIT TOM20-1-RELATED 1 207 IPR010547 GO:0005742|GO:0045040
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca6g01688 Seca-Chr6 71347525 71352165 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca6g01688 - - gmx:100775949 355.14