Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca6g01682 ATGAATATTAACCGCACTGGAAACAAAAAGCAAGGGGGAACCTTCAAGCATAACTCGACCACGGATATTACTCCCCAGCAGATGAGGAGTTCTGCTTGTAAAATGATCCGAACTCTAGTTCAGTTGATGAGAACTCTGGAGAAAATGCCAGAAGAGCGTACCATTTTGATGAAGCTTCTTTACTATGATGATGTGACGCCAGCCGATTATGAGCCTCCTTTCTTCAGGGGCTGCACAGAAGAAGAAGCTCATCAATCGTGGGCGAAAAATCCATTGAAAATGGAGGTCGGGAATGTAAACAGCAAGCATTTTGCGTTAGCTCTGAAGGTGAAGAGTGTGCTCGACCCTTGTGAGGATGATAATGAGGGAATCCAAGATGATATGAGCACTGGTGATGATTCCATGCAAAAGGATGAATATGATGACACTGACAGTGAGGTTGATCATTCTCCAGGAGATCAATATATAGTTGCTCCCATAGACAATACACAGGATCCAGTGGAAGATGAGCAACAACTAGGCCGGGTCAAGGAATGGATCAACTGTTGTCACCTTGATACTATTGAGCTCACTGACGTTCTATCAAATTTTCCAGACATCTCAGTGATTGGTTTTTCAGAGATCATGGACAAGCTTGTCAAGGAAAGTGTGCTGTCAAAAACAGGGAACGACACCTATGCCATTAATAAGAACAAGAAAACTGAATTCGAGTTCACCACCGTGAAAGAAGAAATTGAGGGTCAAATGCCTCAAGTAGTTGGCAGGGCTTTCCAGGTTGAAGATCGCTTATACATGAAAGCTCTCTATCATGCTCTTCCAATGACATATGTGTCAGTCACAAAGCTTCAAAGCTTTCTTGAGGGAGAAGTAAACCAGACAGCAGCACGAAAGATAATCGATAAAATGACTCGGGATGGGTTTGTTGAACCTAAAGGCAGCAAAAGACTAGGGAAACGTGTGATCCATTCTGACTTGACTGAGAGAAAATTCATTGAGGTCCAAAAAGCTCTAGGTGCTGCTGAAGCTATGGATGTTGATCACTGTGAACCAAATAGCAAGTCCAAACAAACTGGTTTCCGTATAAATGGAAACAACCAGAACGTGTCCACATGTGGTGTTCTCCACTCCATTGGATCTGATTTAACACGAATGAAAGTAGCGTCTGATACAAATTATACTGATTCCAGGAGTGGACAGCAAATATCAAAGGCAAAAGAGCCCGGGAGCACCCCAACAAGCAGGCCAGTTGCTTCAAGAGAGAGTTATGCACCAGGAAAAGAAAACAGCACAGCAAATGGAAATAAAATTGCAAATCAAGGTGACGAAGCTGATACTCTTATCTGCAGTAGGTCCTCCCAAGACAAGCGACCAAGGAAAACAAGCGCGGTCAAGGAGCCTATCCATCAAAATATGAAGCGCCAGAGATCTCAGGCTCCGTGA 1440 0.4361 MNINRTGNKKQGGTFKHNSTTDITPQQMRSSACKMIRTLVQLMRTLEKMPEERTILMKLLYYDDVTPADYEPPFFRGCTEEEAHQSWAKNPLKMEVGNVNSKHFALALKVKSVLDPCEDDNEGIQDDMSTGDDSMQKDEYDDTDSEVDHSPGDQYIVAPIDNTQDPVEDEQQLGRVKEWINCCHLDTIELTDVLSNFPDISVIGFSEIMDKLVKESVLSKTGNDTYAINKNKKTEFEFTTVKEEIEGQMPQVVGRAFQVEDRLYMKALYHALPMTYVSVTKLQSFLEGEVNQTAARKIIDKMTRDGFVEPKGSKRLGKRVIHSDLTERKFIEVQKALGAAEAMDVDHCEPNSKSKQTGFRINGNNQNVSTCGVLHSIGSDLTRMKVASDTNYTDSRSGQQISKAKEPGSTPTSRPVASRESYAPGKENSTANGNKIANQGDEADTLICSRSSQDKRPRKTSAVKEPIHQNMKRQRSQAP. 480
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca6g01682 479 Gene3D HORMA domain 1 154 IPR036570 -
Seca6g01682 479 MobiDBLite consensus disorder prediction 389 447 - -
Seca6g01682 479 MobiDBLite consensus disorder prediction 389 479 - -
Seca6g01682 479 MobiDBLite consensus disorder prediction 448 471 - -
Seca6g01682 479 MobiDBLite consensus disorder prediction 131 149 - -
Seca6g01682 479 PANTHER HORMA DOMAIN-CONTAINING PROTEIN 1 1 476 - -
Seca6g01682 479 MobiDBLite consensus disorder prediction 117 152 - -
Seca6g01682 479 MobiDBLite consensus disorder prediction 346 365 - -
Seca6g01682 479 MobiDBLite consensus disorder prediction 1 28 - -
Seca6g01682 479 Pfam HORMA domain 9 103 IPR003511 -
Seca6g01682 479 SUPERFAMILY The spindle assembly checkpoint protein mad2 18 117 IPR036570 -
Seca6g01682 479 ProSiteProfiles HORMA domain profile. 1 110 IPR003511 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca6g01682 Seca-Chr6 71098019 71101913 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca6g01682 K12778 - gmx:100792473 771.926
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Seca6g01682 6 71098019 71101913 Seca6g01682 6 71098019 71101913 ECH