Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca6g01648 ATGAAGATGAAGATGAAGCAGCAATTGACGTGGTTGTGCTTTTTTGTGCTGATCGTGGTTAGTGGAGGCGAAGATTTCGCGAAGAAGTGTAGCGAGGTGGTTTCGCAGGTTTTTCCTTGTTTGGAATTCGCGCAGGGAAAGGCAGCAATACCAAAGAAGGAATGTTGCGACGCAGCTACGAAGATAAAAGAAAGTAGCCCAGAGTGCTTGTGTTATATCATTCAACAAACACATAAAGGTAGCGATCAGAGCAAAAGCCTCGGTATTCAAGAGGGTAAATTGCTTCAGCTTCCTACTGCTTGTCACGTCCAAAACGCCAGTGTCACCGACTGTCCCAAGCTTCTGGGATTAGCTCCAAATTCCCCCGATGCTGCAATATTCACAAATGCTTCCAAAGTAAGTCCTACACCTGCTGATAAACAAACACCATCGACCCCACTGAGCCAGAACGCGGGTTCGTTTGGAAGTATGGTTAGACCTTCTATGATCATCGATGTGATGGTGATGGGTTTGGCCATTGTTCTCATTGGATTTGTCAGCATTTAA 546 0.456 MKMKMKQQLTWLCFFVLIVVSGGEDFAKKCSEVVSQVFPCLEFAQGKAAIPKKECCDAATKIKESSPECLCYIIQQTHKGSDQSKSLGIQEGKLLQLPTACHVQNASVTDCPKLLGLAPNSPDAAIFTNASKVSPTPADKQTPSTPLSQNAGSFGSMVRPSMIIDVMVMGLAIVLIGFVSI. 182
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca6g01648 181 CDD AAI_LTSS 39 103 - -
Seca6g01648 181 SUPERFAMILY Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin 28 111 IPR036312 -
Seca6g01648 181 SMART aai_6 30 111 IPR016140 -
Seca6g01648 181 Gene3D - 27 108 IPR036312 -
Seca6g01648 181 PANTHER BIFUNCTIONAL INHIBITOR/LIPID-TRANSFER PROTEIN/SEED STORAGE 2S ALBUMIN SUPERFAMILY PROTEIN-RELATED 16 147 IPR043325 -
Seca6g01648 181 Pfam Probable lipid transfer 24 111 IPR016140 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca6g01648 Seca-Chr6 70035580 70038522 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca6g01648 29 179 Acyl Lipid Metabolism Gene Families AT1G27950 43.709 1.04e-43 142
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca6g01648 - - gmx:100499777 202.986
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Seca6g01648 6 70035580 70038522 Seca6g01648 6 70035580 70038522 ECH
Seca6g01648 6 70035580 70038522 Seca6g01648 6 70035580 70038522 PCT