Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca6g01646 ATGTCTCAGGTTGATAACAGAAATTCTTCAGCTGCTAAGCGTGCTAGGACTGATGGAAGTCGTAGGGAAGATGATTGGACATGTCCCAGCTGTGGCAATGTCAATTTCTCATTCAGGACAACCTGCAATATGCGTAATTGCACCCAACCAAGGCCGGCTGATCATAATTCGAAATCAGCTGCTAAGCCCCTACAAGCTCCACAGGGTTATTCATCCTCAGCTCCTTATTTAGGTTCTAATACTCCCTCTTCAATATATCTTGGTGTTCCACCATATGGGTCTTCTCTATTCAATGGATCATCTATTCCTCCCTATGATGTTCCATTTTCTGGAGGATCAGCATATCACTACAATTATGGAAGTCGCCTTTCTGCTGGCAGTCCTTATAGACCATTGCATTTATCTGGCCCAACACCATACACAAGTGGATCCATGGTGGGAAATGTTAATATTAACTTTGTTGGGAATTCTTTGGCAGGTGGGATCTATGGCATGCCCCAACTATTGGATCGCTATGGCCTGGGTGTCCCTATTGGACCTGGCACAATGGTAAATGCTAAATGA 564 0.4433 MSQVDNRNSSAAKRARTDGSRREDDWTCPSCGNVNFSFRTTCNMRNCTQPRPADHNSKSAAKPLQAPQGYSSSAPYLGSNTPSSIYLGVPPYGSSLFNGSSIPPYDVPFSGGSAYHYNYGSRLSAGSPYRPLHLSGPTPYTSGSMVGNVNINFVGNSLAGGIYGMPQLLDRYGLGVPIGPGTMVNAK. 188
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca6g01646 187 MobiDBLite consensus disorder prediction 50 73 - -
Seca6g01646 187 MobiDBLite consensus disorder prediction 11 25 - -
Seca6g01646 187 Gene3D - 13 54 - -
Seca6g01646 187 SUPERFAMILY Ran binding protein zinc finger-like 16 54 IPR036443 -
Seca6g01646 187 FunFam ranBP2-type zinc finger protein At1g67325-like 15 54 - -
Seca6g01646 187 PANTHER RNA BINDING PROTEIN 17 112 IPR034870 GO:0003723|GO:0006355
Seca6g01646 187 MobiDBLite consensus disorder prediction 1 25 - -
Seca6g01646 187 Pfam Zn-finger in Ran binding protein and others 22 44 IPR001876 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca6g01646 Seca-Chr6 70021208 70023316 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca6g01646 - - gmx:100796535 348.977
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Seca6g01646 6 70021208 70023316 Seca6g01646 6 70021208 70023316 ECH