Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca6g01589 ATGTATTTGAGCAGCGATTCCCAGGACGTGGATGTTGACGACGATGGCGATTCACAGCGGTCTTGCTCTCAAGGCCACCGTTCTTCTCTGAACCTTCAAACACACCAAGGTGGCTCCATCTGCCTCGTGTGTCTCTCCAACCTCATCTCCAACCCTCTCTCCCCAACCATTCATGTCTCCTACGCTCTCTCTCAGCTCTCTCGATCCCTCTCCTTCCCTCCTTTCCTTAACTCAATCCTCACCTTCCACCCTCACTTCCTCGTTTCCCCTCTCGTCGTCTCACTCTCCTCTTTCGACGACGAACCCATCGCCACACAGCTCATCCACCTCATCCTCGCTCTCTCTGCTTCCGCTGATCCTTCCGTTTGTCGTGAATTCGTGGCTAGGGTTTCAGATCGCATCTCTTCTGGTGCTTTGGCTTGGAGTTCCCGTCAGTTACACATGCTTCACTGCCTCGGGGTTCTTCTGAATTGTGAGAAGGAGGATGATCTCCATACACACATCAAAGATATATATAGCCTCATTTCCGTTCTTGTTACGGGCCTTCAGTTGCCAAGTGAGGAGATTCGTGGCGAGGTCCTTTTTGTCATTTACAAACTATCTGTTCTTCAGAGTACATCGGCAGAGGGAGATGGAAGTGATGTGTTGATTTCCTTCTGTCCAAAACTCTTGTACCTGTTGGGAGATGTTCTCTTGAAAACTCAAAATGATGATGTTCGATTGAATTGTATTGCGCTTTTGACAATGCTGGCTCGAAGACATTTGCTCAGGGAAGAATGTGCATATCATACTAGTAACATGTCCTCCTCTGGTGGAGTTAACTATAAAGAAACCGAAGATGAAACCAAGGGATCATCCCTGGTTAATCTGTTTGCTGAAGCCATCAAAGGCCCATTGCTCTCTTCAGACAGTCAAGTCCAGATTGGCACTCTAGATTTACTCTTTCATTATTTGTCTTCAGTCGGAACTTCAGGCAATCAGATTCGAGTCCTGGTGGAAGAAAATATTGCAGATTATTTATTTGAAATATTAAGATTGTCAGAGTATAAGGATCCAGCAGTCAAAATGTGTCTCCAGATTCTAGATCTTTTATCAACAGCAGAGGAAGCCTTTAAACTAAGGCTTGTTGTTGGGTTTGCCACACTAATTCCAGTACTGCGTTATGTGGCTGAAGTTCCTTTTCATCCAGTCCAATACGAGACACTGAAGCTCATTTTTGAATGCATTTCTGAGTGCCCTGGAGCTGTATCAAGTTCTCAGCTGGAAGAACTAGTTCTTGTTTTGATAAGAATGCTTAAAAAGCATTCTGATGGGGAGATGGGTATGATTCCTGAGACATTCATAATGGCCTGCTCAGTATTTGTGACTCTTATAAGATCTCCACATTGTAACGGAGCTTTAGATCTGTCAAAATCAATCGAGGAAGCAATCAAACATGCCATTTTAGCTTGTCTCTATGTCTCTGAAAGGAATATCAACCAAATTTTGCAATGCTTGTACCTACTTAAAGAGGGATATGCATACAGTCATGATGGAAACCCCACTAACTCTAGTAAACTAGAACTTAGAAGCTGCATTCTAGATATATGCAGAACACATTTACTGCCTTGGCTTGTAACGGGCATCAATGAAATGGAAGAGGAAATTGTCCTGGGTCTGCTAGAAATATTTCATTGGATACTGCATCTGCACTCTAGTATTGATTCCCTGGAATTTGCAGAGACCCTGATGTCATCCTGTTGGTTCAGTTTTTCATATGGATGTCTGGGATTGTTTACAGGAGATAGGATGAAAAATAGAATATATCTGTTACTTAGTTCACTCATGGATTCTCTACTGGGCAATGATTCTGGACAATCAATTCGAGATGCTGCTTTACACCTGCCTTCCGACCCTGTCGATTTACTCTTTCTGCTGGGGCAAAGGAGTACTAACAGTTCAGTTTTTCCTTCTTGTCAATCTGCTGCTTTGCTGATTATGTTCACCAGTTCACTATATGATGAAAGACTTGCAGATGAGAAGTTGGTTTTAGCTTCTCTTGAACAATATATTCTTCTTAATAGCAGTGATTTTCATAATTGGACAACTGATAATTTGACAGTGACACGACTGGTGAATCTTTACAGTTTGTTGAGGGGTCTTGGCAATATGAGCTACCAAATTCACTACAGTCGAGAAGCTGAGGAGATTATATTCCAGTTCATAAACAGTGATGAATGGGATTTACTTTCGGCAAGAATTCACATGGTATCACTGAAGTGGTTGTTTCAACAAGAGAATATAATCAAATCATTGTGTCATCAGATTTTGAAATACTGCAGAAGCTATAACTTAGAAGGGGCTGACATAATTATCGGAAACAATGACCAAATTATAAATGTACAGACACTTGCCGAGTTAGTATCCACTGGAGATAACTATGGTGCTAGGATTTTTGTATGCTTATTGGCACAGCTCTTTGCGGAAGAAGGCCAGGAATATGACATAATATCTGTTCTGAATCTCATGGCAACTATGGTTCATGTTTGTCCAGCTGCTTCTGACCAACTATCCTTGAATGGAATAGGGGCAACAATAAGGACTTGGTGCTTCTCGGAAACAACTTTCATTTCCATCTTGATTTTGGTTTTTAACATTTTGAGTTCAGTGCAGCCTCAAACACTATCTGCTGATCAGAGTTGGGTTGCAGTAACCATGAAGATGATGGAGCATTCTATTCCACCCCAAAAGACTGATATATTAAGTCATGAAAGTCTCTTCGTTATTGGCATTCTTTCCCTGATTTTGCATCTTTCCACCAATAAAGCACTTGAAGAGACGTCAAAGCCCATTCTTTTTAATACTAGTATTATCTCTGTGATCAACACTGTAGTCTGTGCAGCTTCTTCAAAGGGACCTGCTTTGGTTGACCATGACGAGGGAACAAGCACTGGAATAACTTTAATATTTGTTCTTTTTCTCCATTACTTCGCTGTTAAGAGTTTTAGCTTGCATGCTATCCTTCCAGGGTTTGTGGATTGGCAGAACTTCCTTGTTTCAGCGAATCCATCAGAGCCGCTAGCTTTCATAGGCATCCGTTGCCATGACTTGTGCAGACTTCTGCACTTTGGTTCTCCTGTGATCAAGATTATTGCTTCTTATAGCCTGGTAGAGTTGTTTAACAGAATATCAGATCAAATGAACAGTAAACATGTAGAATTGAAATGTGCCGTTGGTTACTTAATGTCCGTAAGGAGTATATTGGAAGGGCTGGTATTCTATAATGACCTGAGAGTGGCTACAAATTGTGCCCTCTGCCTGGCAATGCTTCTAGGATGGGAAAATCTGGCAAAGGAAACAGAATTACTAGGAAAGAGCAGTTGGTATAGATTGATTATAGAGGAGATGACAGTATCTATGTCAGCTCCTTCTTTAGCATCACAATCATTCATGGACAGTCAAAGACCTGCAATCCTTATAGGTATTATGTTGCTAAAACTGCATAAAATCCCCCCGTGGATGAGATCAGTGTTTAATAATTCATGCATATCTGGCATACTGGAGAACCTTGCTGCTACTAATTTGAGCTCAGAGATTTTGGTTTTATTTCGAGAACTTAAGAAATCTGACTTCTTAAGTACTGAGCAAATTGCAACTATAAATCAAATGCTCCAGGAATGCAGAAAGCTTATGTACACTAACAATGCTCATGAGGGACACCCAAATGAGCCGATAAAGAAGGCCCTCACCAACCAATATGATCTTGGAGACGTTTATCAGTATCTCATTGATTTGATGTCATCAGAGACATATATAGATATGGATTCCTGGGGATTTCATATGGGCAGTAGGAGGCTTTTAGAAGAAATAGAGCTGTTTTTCAGTACCTTGACTGTGGATGATGATGGCTGTAGATAG 3897 0.4137 MYLSSDSQDVDVDDDGDSQRSCSQGHRSSLNLQTHQGGSICLVCLSNLISNPLSPTIHVSYALSQLSRSLSFPPFLNSILTFHPHFLVSPLVVSLSSFDDEPIATQLIHLILALSASADPSVCREFVARVSDRISSGALAWSSRQLHMLHCLGVLLNCEKEDDLHTHIKDIYSLISVLVTGLQLPSEEIRGEVLFVIYKLSVLQSTSAEGDGSDVLISFCPKLLYLLGDVLLKTQNDDVRLNCIALLTMLARRHLLREECAYHTSNMSSSGGVNYKETEDETKGSSLVNLFAEAIKGPLLSSDSQVQIGTLDLLFHYLSSVGTSGNQIRVLVEENIADYLFEILRLSEYKDPAVKMCLQILDLLSTAEEAFKLRLVVGFATLIPVLRYVAEVPFHPVQYETLKLIFECISECPGAVSSSQLEELVLVLIRMLKKHSDGEMGMIPETFIMACSVFVTLIRSPHCNGALDLSKSIEEAIKHAILACLYVSERNINQILQCLYLLKEGYAYSHDGNPTNSSKLELRSCILDICRTHLLPWLVTGINEMEEEIVLGLLEIFHWILHLHSSIDSLEFAETLMSSCWFSFSYGCLGLFTGDRMKNRIYLLLSSLMDSLLGNDSGQSIRDAALHLPSDPVDLLFLLGQRSTNSSVFPSCQSAALLIMFTSSLYDERLADEKLVLASLEQYILLNSSDFHNWTTDNLTVTRLVNLYSLLRGLGNMSYQIHYSREAEEIIFQFINSDEWDLLSARIHMVSLKWLFQQENIIKSLCHQILKYCRSYNLEGADIIIGNNDQIINVQTLAELVSTGDNYGARIFVCLLAQLFAEEGQEYDIISVLNLMATMVHVCPAASDQLSLNGIGATIRTWCFSETTFISILILVFNILSSVQPQTLSADQSWVAVTMKMMEHSIPPQKTDILSHESLFVIGILSLILHLSTNKALEETSKPILFNTSIISVINTVVCAASSKGPALVDHDEGTSTGITLIFVLFLHYFAVKSFSLHAILPGFVDWQNFLVSANPSEPLAFIGIRCHDLCRLLHFGSPVIKIIASYSLVELFNRISDQMNSKHVELKCAVGYLMSVRSILEGLVFYNDLRVATNCALCLAMLLGWENLAKETELLGKSSWYRLIIEEMTVSMSAPSLASQSFMDSQRPAILIGIMLLKLHKIPPWMRSVFNNSCISGILENLAATNLSSEILVLFRELKKSDFLSTEQIATINQMLQECRKLMYTNNAHEGHPNEPIKKALTNQYDLGDVYQYLIDLMSSETYIDMDSWGFHMGSRRLLEEIELFFSTLTVDDDGCR. 1299
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca6g01589 1298 PANTHER PROTEIN PRD1 13 1294 IPR044968 GO:0042138
Seca6g01589 1298 SUPERFAMILY ARM repeat 299 920 IPR016024 -
Seca6g01589 1298 MobiDBLite consensus disorder prediction 1 25 - -
Seca6g01589 1298 Gene3D - 39 375 IPR011989 -
Seca6g01589 1298 SUPERFAMILY ARM repeat 52 459 IPR016024 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca6g01589 Seca-Chr6 68130893 68137737 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca6g01589 K25318 - gmx:100784718 2031.14