Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca6g01471 ATGTTCAATAGGTATCAGGATGATTGGCTCAAGACATCAGCAAACTGTCTGCAGCACTGGGAAAAGGCTCCACTAGAACCCTATGCTCTTCAGAAACCCATTACATATTACGTTGTGTGCCCTGACATTGATCCCCTTACTTCTGCTGCTGCTGATTTTTTTCAACAACTAGGAACAGTGTATGAGACATGCAAGCTAGGCACTCATTCACCTCAAGGCTCGGGTAATCAAATGGAGATTGAGTCTACAAAGTTGTCATCTTGTGGTTTTGTTTTACTTGATTGCCCTCAATCAATGAAGATTGAGAGCAGCAATGCATCTCTTGTTGGTTCAGTAAGTGATTATTTTTTATCGTTATCTAATGGTTGGGACCTGACTAGTTATCTCAAGTCTCTGACAAAGGCGCTTAAAGCTTTGAATTTTAGTTCTTGCATTGCCACAAACCCCAGTGAAGGAAGTAACATTTCATGTTTGGTAATCTACGTGGTGTGCCCATTTCCTGATCCTACTGCAATTTTGCAAACTGTTATTGAGTCTTCTGTTACTATTGGGAGATCTAGCTTGCATAGTCAGGTTGTAAAGGCATTAAGTGGCTTGGCAACTGTTGATGAAGCTTTAGCATCTAATATCCCTGTGCTTTCTGGGTTTAGTATTCCTAAATTGGTCTTGCAGATAGTTACAGTTGATGCCATTTTCAGAGTCACGAGCCCATCAGTGAGTGAGCTTGTCATTTTAAAAGAGACTGCCTTTACTGTATACAACAAGGCTCGCCGCATTTCACGTGGAATCTCTAGTGATTATGCTCAATTGGCATTTTCAAGTAGATCTCAGTCTGTTTTGACACAAATGCCTTCTCCCATCTCTGGGATGTGGAAAGACTGTGTTGGTCCTCGAATGACAGGACATTCTCTTCCAAGAGAGGGTGACATTGATGCGAGCTTGAGGTCTGGTACTTGGGATAATACTTGGCAACCAACGAGAACTGGGGTTTTGAGCTGCGATCCAAGTAGAGCTGGGGATATTTTTCTTCATGATGAATATCGTTACATGTTCGAACCCCTTTTTATTCTTGCAGAATCAGGTTCTCCAGAACATGGTATTTCAGTTATTGAGCACTCGTGGATGATAGTAGTGGTAACTATGTGCAGGGTACAAGTATGGCAGGAAGTGTGTATTCTGCTTCAAGCATTGATGGATCTGGGTCTGATCAAAAGACTCATCCAAGCTTACATTGTTGCTATGGATGGACAGAGGATTGGCGTTGGCTTGTATGCATCTGGACAGATTCAAGGGGAGAATTGA 1302 0.4224 MFNRYQDDWLKTSANCLQHWEKAPLEPYALQKPITYYVVCPDIDPLTSAAADFFQQLGTVYETCKLGTHSPQGSGNQMEIESTKLSSCGFVLLDCPQSMKIESSNASLVGSVSDYFLSLSNGWDLTSYLKSLTKALKALNFSSCIATNPSEGSNISCLVIYVVCPFPDPTAILQTVIESSVTIGRSSLHSQVVKALSGLATVDEALASNIPVLSGFSIPKLVLQIVTVDAIFRVTSPSVSELVILKETAFTVYNKARRISRGISSDYAQLAFSSRSQSVLTQMPSPISGMWKDCVGPRMTGHSLPREGDIDASLRSGTWDNTWQPTRTGVLSCDPSRAGDIFLHDEYRYMFEPLFILAESGSPEHGISVIEHSWMIVVVTMCRVQVWQEVCILLQALMDLGLIKRLIQAYIVAMDGQRIGVGLYASGQIQGEN. 434
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca6g01471 433 Pfam MID domain of medPIWI 32 147 IPR041285 -
Seca6g01471 433 Pfam MID domain of medPIWI 150 258 IPR041285 -
Seca6g01471 433 PANTHER MEDIATOR OF RNA POLYMERASE II TRANSCRIPTION SUBUNIT 13 4 365 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca6g01471 Seca-Chr6 64450852 64453012 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca6g01471 K15164 - gmx:100782017 655.981