Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca6g01459 ATGTTATTGGTAGTGAAGATGTCAAGCAACTTCACTTTGATTACTTATGAAGATGTTCCAAGTCTTGAAGATTTTCCTCTGATCTTAAAACTGACACAAAGAGATCCCCGTGGTTTTGGTTTTGTCCAATATGTTGATCCTGCGGATGCTGCTGATGCTAAATATCATATGGATGGTCAAATTCTTCTTGGGCGGGAGTTGACTGTTGTCTTTGCTGAGGAAAATAGAAAGAAGCCAACCGAGATGAGGCAAAGAGAGAGAAGGGGGGGTAGATTTTATGATCGAAGGAGGTCTCCTCCTCGTTATTCTCGTTCGCCCCGCTACTCTCGATCTCCACCACCACGTCATAGATCTCGCTCTCGCAGTCGTGACTATTATTCCCCTCCTCCTAAACGAAGGGAATATTCAAGATCTGTCTCACCTGAAGAAAGAAGGTACAGTCGAGAAAGATCATATTCACATCATAGCAGAGAGAGGTCATACTCACGCTCTCCGCCCTATAATGGGGGTTCAAGAAGCCGTAGTCAGAGTCCAGCAAAGGGCCCAGGCCCTAGCAGAAGTCCAACTCCAAACCGTGATGATGTTAGGGAATCAGGCCGTGGTAGGTCCCCCAGTCAGTGA 621 0.4654 MLLVVKMSSNFTLITYEDVPSLEDFPLILKLTQRDPRGFGFVQYVDPADAADAKYHMDGQILLGRELTVVFAEENRKKPTEMRQRERRGGRFYDRRRSPPRYSRSPRYSRSPPPRHRSRSRSRDYYSPPPKRREYSRSVSPEERRYSRERSYSHHSRERSYSRSPPYNGGSRSRSQSPAKGPGPSRSPTPNRDDVRESGRGRSPSQ. 207
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca6g01459 206 Gene3D - 11 93 IPR012677 -
Seca6g01459 206 MobiDBLite consensus disorder prediction 162 182 - -
Seca6g01459 206 SUPERFAMILY RNA-binding domain, RBD 32 101 IPR035979 GO:0003676
Seca6g01459 206 PANTHER TRANSFORMER-2 SEX-DETERMINING PROTEIN-RELATED 32 186 - -
Seca6g01459 206 MobiDBLite consensus disorder prediction 76 206 - -
Seca6g01459 206 MobiDBLite consensus disorder prediction 118 161 - -
Seca6g01459 206 Pfam RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) 25 67 IPR000504 GO:0003723
Seca6g01459 206 MobiDBLite consensus disorder prediction 76 101 - -
Seca6g01459 206 ProSiteProfiles Eukaryotic RNA Recognition Motif (RRM) profile. 1 74 IPR000504 GO:0003723
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca6g01459 Seca-Chr6 64161190 64164509 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca6g01459 K12900 - gmx:100775883 188.348