Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca6g01433 ATGGTTTCCAAAAGGGTGACTGATCTAGCATTTTGCTCCACCTTACTGCTACTTTTGGTTGGTTTTGCAAGCTCTGATTTAACCAAAGACAGAGGAGAATGTGCTGACAAACTAATTGGACTAGCTAGCTGTCTTGATTATGTTAGTGGTGAGGCCAAAAACCCCACCATAGACTGCTGCAGTGGCCTCAAAGAGGTCCTTGATAAGAGCAAGAAATGCATCTGCATCCTCATCAAAGATCGCAATGACCCTGACCTTGGCTTCAAGATGAATGCCACTCTTGCTGTGCACCTACCTAGTGCTTGCCATGCCCCTGCTAATATATCGCAGTGTGTAGATCTTTTGCATTTGGCACCTAACTCTCCTGATGCTAAGGTGTTTGAGGGGTTTGAAAATTCCACCAAAACAAACAGTTCCACTTCCACCCCAGTTTCCAGTGGTAGTGGTGTTGAGAAGGGATCAAGTCCAATTGCTCAGGAAAAGAGTGGTTCAGGTTTGGGAAAGAGGTGGCTGGTGGCGGAGGTGGTTTGTGGTATTTTACCATTTGTTTTCATGTCCTACTTCTTCATCCTAGCTTGA 579 0.4542 MVSKRVTDLAFCSTLLLLLVGFASSDLTKDRGECADKLIGLASCLDYVSGEAKNPTIDCCSGLKEVLDKSKKCICILIKDRNDPDLGFKMNATLAVHLPSACHAPANISQCVDLLHLAPNSPDAKVFEGFENSTKTNSSTSTPVSSGSGVEKGSSPIAQEKSGSGLGKRWLVAEVVCGILPFVFMSYFFILA. 193
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca6g01433 192 MobiDBLite consensus disorder prediction 132 162 - -
Seca6g01433 192 SMART aai_6 34 111 IPR016140 -
Seca6g01433 192 SUPERFAMILY Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin 33 112 IPR036312 -
Seca6g01433 192 PANTHER BIFUNCTIONAL INHIBITOR/LIPID-TRANSFER PROTEIN/SEED STORAGE 2S ALBUMIN SUPERFAMILY PROTEIN-RELATED 18 145 IPR043325 -
Seca6g01433 192 Gene3D - 32 111 IPR036312 -
Seca6g01433 192 FunFam Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein 31 111 - -
Seca6g01433 192 Pfam Probable lipid transfer 28 111 IPR016140 -
Seca6g01433 192 MobiDBLite consensus disorder prediction 132 161 - -
Seca6g01433 192 CDD AAI_LTSS 41 103 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca6g01433 Seca-Chr6 63304023 63305623 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca6g01433 26 191 Acyl Lipid Metabolism Gene Families AT2G44300 44.444 4.13e-50 159
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca6g01433 - - pvu:PHAVU_001G268300g 244.588