Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca6g01419 ATGGGTCTGGTTTTTGTGCCTCCTATTGTTATATTGTCTCTGTTGTTTTCACTAAGCCCAGTCTTTGTTCATGGTGGAGTTCCCACCACTCTTGACGGACCCTTCAAGCCTGTGACCATTCCTCTTGACCAGAGCTTCCGTGGAAATGCGGTGGACCTGCCAGACATAGATCCTTTGGTTCAAAGAACCGTTGAAGGGTTTGAGCCAGAACAAATCTCTGTCTCCCTCTCTGCATCCCATGACTCTGTTTGGATTTCTTGGATTACAGGGGACTTCCAAATTGGGGACAATATAGAACCCTTAGATCCTAGCACAGTTTCTAGCATAGTTCAGTATGGAAGGTACGGAAGGTCCATGTCTCACCAAGCTGTGGGTTATTCCCTTGTTTACAGTCAACTTTATCCTTTTGAAGGCCTTCAGAACTACACTTCTGGAATTATACATCATGTTCGTCTCACAGGATTGAAACCCAACACACTATATCAATATCAATGTGGAGATCCTTCTTTGTCAGCAATGAGTAAAGTTCATTATTTCAGGACTATGCCAGCTTCAGGTCCCAAGAGCTACCCTAGCAGAATAGCAGTGGTTGGAGACTTGGGTCTTACATACAATACCACATCCACTGTCAATCATATGATCAGTAATCATCCCGATCTCATTCTATTGGTTGGAGATGTTAGCTATGCTAACCTGTATCTTACTAATGGTACTGGAGCAGACTGTTACTCTTGTTCATTTTCTAACACTCCCATCCATGAAACATATCAGCCTCGTTGGGATTATTGGGGAAGGTACATGCAACCTCTGATTTCTAATGTCCCAATAATGGTAGTAGAAGGGAATCATGAGATAGAACAACAAGCTGAGAACAAGACATTTGTTGCTTATAGTTCTCGATTTGCATTCCCATCAGAAGAGAGTGGATCATCATCCACTTTCTATTATTCTTTCAATGCTGGAGGAATACATTTTATAATGCTTGGGGCTTACATATCTTATAGCAAATCAGGGGAACAATACAAGTGGTTGGAGAGTGACTTGGCTTCTGTTGACAGGGAAGTAACTCCATGGTTGGTAGCTACATGGCATCCACCTTGGTACAGCACCTACAAGGCACACTATAGAGAAGCAGAGTGTATGAGGGTGGAGATGGAAGACTTGCTATATCAGTATGGTGTTGACATTGTCTTCAATGGACATGTTCATGCCTATGAGAGATCAAACCGAGTATATAACTACAAATTGGATCCCTGTGGTCCTGTTTATATCACAGTTGGTGATGGTGGGAACCGGGAAAAGATGGCAATTACACATGCTGATGAACCTGGAAACTGTCCAGAACCATCAACTACACCAGACAGCTTTATGGGTGGCTTCTGTGCCTTTAATTTCACATCTGGTCCAGCAGCAGGTAAGTTCTGCTGGGACCGACAGCCTGATTATAGTGCTTTCAGAGAAAGTAGCTTTGGTCATGGAATTCTAGAGGTGAAAAATGAAACCCATGCTTTGTGGATTTGGCATCGCAATCAAGACTTCTATGGTATTGCTGGAGATGAGATTTACATTGTTAGGCAGCCTGAAAGGTGTTCAGTTTAA 1599 0.429 MGLVFVPPIVILSLLFSLSPVFVHGGVPTTLDGPFKPVTIPLDQSFRGNAVDLPDIDPLVQRTVEGFEPEQISVSLSASHDSVWISWITGDFQIGDNIEPLDPSTVSSIVQYGRYGRSMSHQAVGYSLVYSQLYPFEGLQNYTSGIIHHVRLTGLKPNTLYQYQCGDPSLSAMSKVHYFRTMPASGPKSYPSRIAVVGDLGLTYNTTSTVNHMISNHPDLILLVGDVSYANLYLTNGTGADCYSCSFSNTPIHETYQPRWDYWGRYMQPLISNVPIMVVEGNHEIEQQAENKTFVAYSSRFAFPSEESGSSSTFYYSFNAGGIHFIMLGAYISYSKSGEQYKWLESDLASVDREVTPWLVATWHPPWYSTYKAHYREAECMRVEMEDLLYQYGVDIVFNGHVHAYERSNRVYNYKLDPCGPVYITVGDGGNREKMAITHADEPGNCPEPSTTPDSFMGGFCAFNFTSGPAAGKFCWDRQPDYSAFRESSFGHGILEVKNETHALWIWHRNQDFYGIAGDEIYIVRQPERCSV. 533
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca6g01419 532 SUPERFAMILY Metallo-dependent phosphatases 193 514 IPR029052 -
Seca6g01419 532 CDD MPP_PAPs 188 525 IPR041792 -
Seca6g01419 532 Gene3D - 68 185 - -
Seca6g01419 532 Pfam Purple acid Phosphatase, N-terminal domain 69 181 IPR015914 GO:0003993|GO:0046872
Seca6g01419 532 Gene3D - 188 455 IPR029052 -
Seca6g01419 532 Gene3D - 461 531 IPR029052 -
Seca6g01419 532 Pfam Calcineurin-like phosphoesterase 193 405 IPR004843 GO:0016787
Seca6g01419 532 Pfam Iron/zinc purple acid phosphatase-like protein C 420 512 IPR025733 -
Seca6g01419 532 PANTHER ACID PHOSPHATASE RELATED 19 529 IPR039331 GO:0003993
Seca6g01419 532 FunFam Purple acid phosphatase 188 450 - -
Seca6g01419 532 SUPERFAMILY Purple acid phosphatase, N-terminal domain 47 183 IPR008963 GO:0003993|GO:0046872
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca6g01419 Seca-Chr6 62794380 62800644 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca6g01419 68 431 Miscellaneous Gene Families AT2G03450 25.537 4.05e-22 98.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca6g01419 K22390 - gmx:100784006 1018.45
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Seca6g01419 6 62794380 62800644 Seca6g01419 6 62794380 62800644 ECH