Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca6g01386 ATGAGATTGCCTGAATTGAAGTTTAGTGGTCAAATTATGTATAGCAGGACTTTTGATGATGTGCAGAGTGCCATAACAAGGCTCTTAAAATTTCTGGAAGAAAAGAAAAGAGAGATGGTGCAAATTGCAATTGGATTGGACGTGGAGTGGAGACCCACCTTCCAAAAAGGTGCTCCACCAAACAAAGTAGCAGTGATGCAGATATGTGGTGATGCTAGTCACTGTCATGTTCTACATCTAATTCATTCTGGAATCCCACAAAATCTACAGCTTTTGCTTGAAGATTCCTCAGTTTTGAAGGTTGGAGTTGGGATTGGTGAGGATGTTGCTAAGGTTTTTAGAGACTATAACATCTCTATCAAAGGTGTGGAAGATCTTTCTTTTCATGCTAATCAAAAGCTAGGCAGAGGTCCTCATCAGTGGGGTCTTGGATCGTTGACAGAAAAAGTTTTGTCAAAACAGCTTAGAAAGCCCAAAAAAATAAGAATGGGAAATTGGGAGTCTTTCCTTTTGTCAAGGGGGCAGCTACAATATGCTGCCACAGATGCTTATGCTTCTTGGTATCTCTATCAGGCGATTAAAAATCTCCCGGAGGGCCAGGAAGTACCTGACAGTAGTGGCCAAGTTGATGGTGTACCGCAACAATGA 648 0.4167 MRLPELKFSGQIMYSRTFDDVQSAITRLLKFLEEKKREMVQIAIGLDVEWRPTFQKGAPPNKVAVMQICGDASHCHVLHLIHSGIPQNLQLLLEDSSVLKVGVGIGEDVAKVFRDYNISIKGVEDLSFHANQKLGRGPHQWGLGSLTEKVLSKQLRKPKKIRMGNWESFLLSRGQLQYAATDAYASWYLYQAIKNLPEGQEVPDSSGQVDGVPQQ. 216
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca6g01386 215 SUPERFAMILY Ribonuclease H-like 43 194 IPR012337 -
Seca6g01386 215 PANTHER 3-5 EXONUCLEASE 21 196 - -
Seca6g01386 215 SMART 35exoneu6 16 198 IPR002562 GO:0003676|GO:0006139|GO:0008408
Seca6g01386 215 FunFam Werner Syndrome-like exonuclease 1 200 - -
Seca6g01386 215 Gene3D - 1 199 IPR036397 GO:0003676
Seca6g01386 215 Pfam 3'-5' exonuclease 27 195 IPR002562 GO:0003676|GO:0006139|GO:0008408
Seca6g01386 215 CDD WRN_exo 34 195 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca6g01386 Seca-Chr6 61838566 61844164 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca6g01386 K22807 - gmx:100801291 326.25
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Seca6g01386 6 61838566 61844164 Seca6g01386 6 61838566 61844164 ECH