Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca6g01352 CAGCACTATGTGTATGAAGCAATAAAATCTGATGACATTGCTACACTTGTATACACAAGTGGAACTACTGGAAATCCAAAAGGTGTTGTGCTAACCCATCAGAATCTTTTGCATCAGATTAAAAACTTAGGGGACATTGTACCTGCTGAAGTTGGGGATAGATTTCTAAGCATTCTGCCTTCTTGGCATGCATATGAAAGAGCTTGTGAGTATTTCATTTTCTCATGTGGTGTTGAACAAGTGTACACAACTGTGAGAAACTTGAAGGATGATTTGGGACGTTATCAGCCACACTACTTGATTTCTGTTCCTTTAGTTTATGAAACATTATACAGAAAATGTGGGTTGGACTCCATTTTGCTGATTGGACATGATTTGGGCTACCACTGCCTTACAGCAAATTGGATCTATTTGGAAAGAAGGGACATGACTGAAGGAATAGGTCCAACCCTTCCAATGCCTAATCCTATCATATTGTCAAATATTCAAATTTCTTTCCATTTACACATGCTCACCTCATCTAAGGCTATTGGTGTGAACTTGCAGAATGGATATGGTTTGACAGAAACTTCACCAGTTATTATAATGTATGCAGTATATTATATGGTTATTGGATCTGAAACTGGTGAAGTTGTAGATTCTGAAACTGGTGAAGTTCTTCCACCTGGTTCAAAGTGA 678 0.3805 QHYVYEAIKSDDIATLVYTSGTTGNPKGVVLTHQNLLHQIKNLGDIVPAEVGDRFLSILPSWHAYERACEYFIFSCGVEQVYTTVRNLKDDLGRYQPHYLISVPLVYETLYRKCGLDSILLIGHDLGYHCLTANWIYLERRDMTEGIGPTLPMPNPIILSNIQISFHLHMLTSSKAIGVNLQNGYGLTETSPVIIMYAVYYMVIGSETGEVVDSETGEVLPPGSK. 226
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca6g01352 225 Pfam AMP-binding enzyme 7 223 IPR000873 -
Seca6g01352 225 PRINTS AMP-binding signature 23 31 IPR020459 -
Seca6g01352 225 PRINTS AMP-binding signature 11 22 IPR020459 -
Seca6g01352 225 ProSitePatterns Putative AMP-binding domain signature. 16 27 IPR020845 -
Seca6g01352 225 PANTHER ACYL-ACTIVATING ENZYME 16, CHLOROPLASTIC-RELATED 175 225 - -
Seca6g01352 225 Gene3D - 2 225 IPR042099 -
Seca6g01352 225 SUPERFAMILY Acetyl-CoA synthetase-like 4 223 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca6g01352 Seca-Chr6 60537502 60540162 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca6g01352 2 225 Acyl Lipid Metabolism Gene Families AT3G23790 49.640 4.81e-73 233
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca6g01352 K01897 - gmx:100782583 266.929