Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca6g01241 ATGGAGTTACCACCTCTTAAAATACCCTTCATCCACTGGATTTTCCTTTCTGTCATTGTATTTGTTCAAGTTACCAATGGTTTTTATCTTCCGGGAAGCTACATGCACACTTATTCCAATGGAGATCCCATATATGCCAAAGTCAATTCGTTGACTTCTATCGAAACCGAGCTTCCTTTCAGCTACTACAGCCTCCCTTACTGCCAGCCCCCTGGTGGCATAAAGAAAAGTGCTGAGAATCTTGGCGAACTTCTTATGGGAGATCAGATTGATAACTCACCCTACAGATTTCGAATGAATATTAATGAGACACTCTACCTCTGTACGACATCACCGCTGAATGAGCATGAGGTAAAGCTGCTTAAACAAAGAACGCGTGATCTGTATCAAGTGAATATGATCCTTGACAACTTGCCAGTTATGAGGTACACTACCCAAAATGGTGTTAAAATCCAGTGGACAGGGTTCCCTGTTGGATACACTCCGTCTGATAGTGGTGCAGATTACATCATTAACCACCTCAAATTCACGGTCTTGGTTCATGAATATGAAGGAAGCGGGGTTGAAATTATTGGGACTGGGGAGGAAGGTTTGGGTGTCATTTCTGAAGCTGACAAGAAGAAGGCATCTGGGTATGAAATAGTTGGTTTTCAGGTTGTCCCTTGCAGCATTAAATATGATCCTGAAGCCATGAAAAAGCACAAAATGTATGATAGTATCCCTTCTGCAAGCTGCCCAACTGAGCTTGACAAGTATCAAGTAATAAAAGAGCAAGAAAGGATATCATTCACATATGAGGTTGAATTTGTGAAGAGTGATATAAGATGGCCATCACGTTGGGATGCTTATTTAAAGATGGAGGGTTCCCGCGTTCATTGGTTCTCAATCCTAAATTCACTTATGGTTATCTTTTTCCTAGCTGGTATTGTTTTTGTCATTTTCTTAAGAACTGTAAGAAGGGACTTGACAAGGTATGAGGAATTGGACAAAGAGGCCCAGACTCAGATGAATGAGGAGCTTTCTGGATGGAAACTTGTTGTGGGTGATGTATTTAGGGAGCCTGATTGCTCAAAGCTTCTCTGTGTAATGGTTGGTGATGGGGTTCAGATTCTTGGAATGGCTGGTGTCACTATTGTTTTTGCAGCACTTGGTTTCATGTCACCAGCATCCCGAGGAATGCTACTAACAGGGATGATCATTTTATATCTCATCCTGGGAATTGTTGCCGGCTATGTCAGCGTGCGACTCTGGAGGACCATTAAGGGAACCACAGAAGGGTGGAGATCAATTTCCTGGTCTGCTGCATGTTTTTTCCCTGGAATTGCTTTCTTTATTCTTACAGTACTCAATTTTATTCTATGGGGCAGCAACAGTACTGGTGCTATACCCATTTCCTTGTATTTTGAGCTGTTCTTCCTCTGGTTCTGCATTTCAGTACCTCTTACCCTCATTGGAGGATTTATGGGGACAAAAGCTCAGCCGATCGAGTATCCTGTGCGGACTAATCAGATACCAAGGGAAATTCCTGCACGTAAATATCCATCATGGCTTCTTGTTCTTGGTGCTGGAACTCTTCCATTTGGAACGCTCTTCATTGAGCTTTTCTTTATCCTTTCCAGTATCTGGCTTGGGAGGTTCTATTATGTGTTTGGTTTCCTGTTGGTTGTTCTTCTATTGCTGGTTATTGTTTGTGCTGAAGTGTCGGTGGTCCTCACATATATGCATCTTTGTGTGGAAGATTGGCGGTGGTGGTGGAAGGCATTCTTTGCTTCAGGTTCTGTTGCTCTTTATGTCTTCTTGTACTCCATTAACTACTTGGTTTTCGACCTGCAGAGTTTGAGTGGACCTGTCTCGGCTACCCTTTATCTCGGCTATTCACTACTCATGGCAATTGCAATCATGTTGTCAACTGGCACCATTGGCTTCCTTATGTCATTCTACTTTGTGCACTACTTGTTCTCATCAGTGAAGATAGATTGA 1980 0.4263 MELPPLKIPFIHWIFLSVIVFVQVTNGFYLPGSYMHTYSNGDPIYAKVNSLTSIETELPFSYYSLPYCQPPGGIKKSAENLGELLMGDQIDNSPYRFRMNINETLYLCTTSPLNEHEVKLLKQRTRDLYQVNMILDNLPVMRYTTQNGVKIQWTGFPVGYTPSDSGADYIINHLKFTVLVHEYEGSGVEIIGTGEEGLGVISEADKKKASGYEIVGFQVVPCSIKYDPEAMKKHKMYDSIPSASCPTELDKYQVIKEQERISFTYEVEFVKSDIRWPSRWDAYLKMEGSRVHWFSILNSLMVIFFLAGIVFVIFLRTVRRDLTRYEELDKEAQTQMNEELSGWKLVVGDVFREPDCSKLLCVMVGDGVQILGMAGVTIVFAALGFMSPASRGMLLTGMIILYLILGIVAGYVSVRLWRTIKGTTEGWRSISWSAACFFPGIAFFILTVLNFILWGSNSTGAIPISLYFELFFLWFCISVPLTLIGGFMGTKAQPIEYPVRTNQIPREIPARKYPSWLLVLGAGTLPFGTLFIELFFILSSIWLGRFYYVFGFLLVVLLLLVIVCAEVSVVLTYMHLCVEDWRWWWKAFFASGSVALYVFLYSINYLVFDLQSLSGPVSATLYLGYSLLMAIAIMLSTGTIGFLMSFYFVHYLFSSVKID. 660
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca6g01241 659 Pfam Endomembrane protein 70 59 612 IPR004240 GO:0016020
Seca6g01241 659 PANTHER TRANSMEMBRANE 9 SUPERFAMILY PROTEIN 26 659 IPR004240 GO:0016020
Seca6g01241 659 SUPERFAMILY MFS general substrate transporter 293 490 IPR036259 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca6g01241 Seca-Chr6 50363548 50366985 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca6g01241 11 659 Miscellaneous Gene Families AT4G12650 84.900 0.0 1115
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca6g01241 K17086 - gmx:100782426 1222.61
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Seca6g01241 6 50363548 50366985 Seca6g01241 6 50363548 50366985 ECH