Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca6g01091 ATGTCAACCGTCTTCTCCGCACCTGCAAACCTTTCCCCTCTATTTTCTAAGGTACCTCGATCCTTATCCACTCGACATAAATTTTTTTACACTTACCCTGAAAGTTATATGAGATTCCATCCAAATGGGTGCCATCCACTTCGACATTGGAGCTTAAAATCGAGGACGCAGCCCTGTACAAACTCTTTGGTATCTGATGTTTACAGTCGAGATAAGTTTCCAAAGGTGGGTGCACGATCGACTGGGCCCATTGCACCTAGTCACCTCATTGAAGTGGTTAAAACTGCAGCTCAGACTGGTGCTCAGGTTGTGATGGATGCTGTTAATAAGCCACGGAATATTACATATAAAGGATTAACTGACTTGGTGACTGAGACAGATAAAATGAGTGAAGCTGCCATATTAGAAGTGGTGAAAAATAATTTTGAAGATCATCTTATTCTTGGGGAAGAAGGAGGAATTATAGGAGATGCAGCATCTGATTATCTCTGGTGCATTGATCCTTTAGATGGGACTACAAACTTTGCACATGGCTATCCCAGCTTTGCTGTTTCTGTTGGAGTTCTATATCGAGGGAATCCTGCTGCTGCGTCAGTGGTTGAGTTTGTTGGAGGTCCCATGTGTTGGAATACCCGCATTTTCTCTGCAACTGCTGGTGGTGGAGCATTCTGCAATGGCCAAAGGATCCAAGTGAGTGCTACTAATCAGGTGGAACAATCTCTTCTGGTGACAGGTTTTGGATATGAGCATGATGATGCATGGGCTACTAACATAGACTTATTCAAAGAATTTACTGATGTCAGCAGGGGTGTAAGACGGCTTGGTGCAGCTGCTGTGGACATGTGTCATGTAGCTTTAGGAATTGTAGAAGCTTATTGGGAATATCGTCTAAAGCCATGGGATATGGCTGCTGGTGTTTTGATGGTAGAGGAAGCTGGCGGCACAGTTTCTCGGATGGATGGTGGAAAATTTTGTGTTTTCGATAGATCTGTTTTGGTTTCGAATGGTATGCTCCATGCAAAGCTTCTGGAAAGAATTGGACCTGCAACAGAGAAATTAAAAACCAAGGGAATTGATTTCTCATTATGGTATAAACCTGAGGATTACAGGGCAGACGTTTAA 1122 0.4323 MSTVFSAPANLSPLFSKVPRSLSTRHKFFYTYPESYMRFHPNGCHPLRHWSLKSRTQPCTNSLVSDVYSRDKFPKVGARSTGPIAPSHLIEVVKTAAQTGAQVVMDAVNKPRNITYKGLTDLVTETDKMSEAAILEVVKNNFEDHLILGEEGGIIGDAASDYLWCIDPLDGTTNFAHGYPSFAVSVGVLYRGNPAAASVVEFVGGPMCWNTRIFSATAGGGAFCNGQRIQVSATNQVEQSLLVTGFGYEHDDAWATNIDLFKEFTDVSRGVRRLGAAAVDMCHVALGIVEAYWEYRLKPWDMAAGVLMVEEAGGTVSRMDGGKFCVFDRSVLVSNGMLHAKLLERIGPATEKLKTKGIDFSLWYKPEDYRADV. 374
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca6g01091 373 Gene3D - 85 229 - -
Seca6g01091 373 SUPERFAMILY Carbohydrate phosphatase 87 350 - -
Seca6g01091 373 CDD IMPase 89 335 IPR033942 GO:0008934
Seca6g01091 373 PRINTS Inositol monophosphatase superfamily signature 121 141 IPR000760 -
Seca6g01091 373 PRINTS Inositol monophosphatase superfamily signature 219 242 IPR000760 -
Seca6g01091 373 PRINTS Inositol monophosphatase superfamily signature 266 287 IPR000760 -
Seca6g01091 373 PRINTS Inositol monophosphatase superfamily signature 297 321 IPR000760 -
Seca6g01091 373 PRINTS Inositol monophosphatase superfamily signature 164 180 IPR000760 -
Seca6g01091 373 PRINTS Inositol monophosphatase superfamily signature 143 159 IPR000760 -
Seca6g01091 373 FunFam Inositol-1-monophosphatase 230 359 - -
Seca6g01091 373 Pfam Inositol monophosphatase family 88 345 IPR000760 -
Seca6g01091 373 ProSitePatterns Inositol monophosphatase family signature 1. 164 177 IPR020583 -
Seca6g01091 373 ProSitePatterns Inositol monophosphatase family signature 2. 300 314 IPR020550 GO:0046854
Seca6g01091 373 PANTHER INOSITOL MONOPHOSPHATASE 87 355 - -
Seca6g01091 373 Gene3D - 230 353 - -
Seca6g01091 373 FunFam Inositol-1-monophosphatase 86 229 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca6g01091 Seca-Chr6 41654488 41672218 Dispersed/Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca6g01091 K01092 - gmx:100796770 612.838