Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca6g00938 ATGGACGATCACCGAAATTCAACGCCCAACGCCATTGGACTCTGCCTCCTCCCACAAGAACTCATCCAAAACATCTTCCTCTCCCTCGTCTTACCCGAAATCGTTCGTCTCAAACTCGTCAACAAGTCCTTCTCTCGCATTATCTCCGATCACACCTTCGTTCGTCAGTGCAACTCCCTCTCCACCTCCACCACCTGGCTCTTCGTCTACAAGAAGCGCTGGCTCCGTGACGCCGTCCTCCACGCCTTCACCGATCGGAGCTCCGATCGCTGGTTCCGGATCCCCATCGCCGAGCTTCTCAAACCCGTTCACTTTCACGGCGAGGACCTTTACTTCCTCGCCGCTTCCGCTAACGTCTTCCTCTTTGCCTCCAACAACGTTCGTGAGGTCGTTGCCGTTAATTTAGTCACCGTCACCGTTAAGAAGATCCCCCCTTCCCCTCTTGGTCCACGTGGCACTTCTTCGTGGAGGAGATCCGGGATGAAGCTAGTGTCTGACCCGACCGGGTCGGGTCATTTCCGCTTCATGTTCGCGGAGTTCGTGGGGAACCGACCCGTTTTGTTTGTCTACAATTCTGAGACTGACACGTGGAAGTCAACGGAGGCTGAAGAAAACGGGACCAGTGGGTTTTTGCCACGTGGAGGGGCGCGCGTCTTTCTCAACGTGGTTCACGGGCCCAGGGAGAGCGTTCTGGTTGCGTCAACACCTAAGTGTGACGCGGCAGTGGTTCTACGGCCACGATTTAATGATGATGGGAGAGTCGGTGATGGGAGATTGACCGTTGGATTCACCTGGGGGAACGTGATTGATCGTTTACACGTGTACGGTGATGGGTACATGATGATTGTGAAATCGGAGGGTGTGAGGGTAACTGGAGAGCACGGAATTACCAGGAATCTGAGGGTGTTGAAGGGTGTGGAATTGTGGGGTTTGAGTTTGGATGGAAGGAAATGGGAGTTTGTGTCTGCGGTTCCTGGTGAAGTGATGAGGGTTATTGAGAAGCCTTATGGAGTAATGATGGGGTGCTTAGAGGAGAAAAATGGGATCATTAGGGCTGCTTTGGTGTCTAATTGTGACGGTTTTTGGGACATGTTATGGCTCTCTTTTGATACCAAATGGAACCAATGGACCTGGATGCCACTACCTGATTGCAAAATGAAGGGTTGGAACATGGCTGGAATAAGCTTCTCCTCAGGACTTACCTTGCCCTGA 1212 0.5256 MDDHRNSTPNAIGLCLLPQELIQNIFLSLVLPEIVRLKLVNKSFSRIISDHTFVRQCNSLSTSTTWLFVYKKRWLRDAVLHAFTDRSSDRWFRIPIAELLKPVHFHGEDLYFLAASANVFLFASNNVREVVAVNLVTVTVKKIPPSPLGPRGTSSWRRSGMKLVSDPTGSGHFRFMFAEFVGNRPVLFVYNSETDTWKSTEAEENGTSGFLPRGGARVFLNVVHGPRESVLVASTPKCDAAVVLRPRFNDDGRVGDGRLTVGFTWGNVIDRLHVYGDGYMMIVKSEGVRVTGEHGITRNLRVLKGVELWGLSLDGRKWEFVSAVPGEVMRVIEKPYGVMMGCLEEKNGIIRAALVSNCDGFWDMLWLSFDTKWNQWTWMPLPDCKMKGWNMAGISFSSGLTLP. 404
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca6g00938 403 CDD F-box_SF 17 49 - -
Seca6g00938 403 PANTHER BNACNNG10540D PROTEIN 16 201 - -
Seca6g00938 403 SMART fbox_2 17 57 IPR001810 GO:0005515
Seca6g00938 403 SUPERFAMILY F-box domain 3 74 IPR036047 GO:0005515
Seca6g00938 403 ProSiteProfiles F-box domain profile. 11 57 IPR001810 GO:0005515
Seca6g00938 403 Pfam F-box domain 16 53 IPR001810 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca6g00938 Seca-Chr6 33124028 33125239 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca6g00938 - - gmx:100805433 667.922