Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca6g00922 ATGGAGATGAATTCGAATGCTTCGGGGTCAGCAATGGTGTTAGAAACCCTAAGAAGCAGAGGTTGGTGTTTGGAAGAGACAGACCAATTGAAGGCTATCATTGTTATTCAATCCGCACTAGCCATTGACCGTTCCAAGTTGGTAGATTCTGTGGAGTCGGAGCTCCTCAATTCGGACCTTAGATCCATCGGAGCCAAGTCCTTTCCCGAATCCTCTCTTCTTCGCAACCCTTCTTCTTCGTATCTTCACGGTCCCAAAATCCTTCAGATATCTTCAGTGAGGGACATATCTAAGAACAGTGTGGATGATATTTCAAAAAATTCAGGTGGTCGGAGACTTCTTAGATTATGTCTCACTGATGGTCACTCAGAGATAACTGCTATAGAATATTCTCACATTCCATTCATACCTGATAATGTGGTTCCCGGTACTAAGATTCGTTTGGACAATAAAGTTGTGGTTCACAGTGGTATAGCTTGCTTAAATCCTAAAGTGTTGACTGTATTAGGAGGTGTTGTTCAATCACTCTATGAAGAGTGGCAGATGAACCAAAAATATTCAGGATTCTCTCGATCGTCTTTAAGAAAGCTAGAGGATCATGATACAGGTGGTCCTCCTCCATTTGTGAAGCTTCAGGCTGGATCATCCTCAGGCTATGCAGATTATAAAGCTAGAAGTAATAAGCCCATTACAATGGTCGGTGAACCTGAGATGAGGCCAACTGGTATCCAGCAAAATCCTAATCAGAAAGCAGATATTTTGGATGTAAATCTAAAATCCAAATTACCTACAGAAAGAGCTGAAGACAAGCCTAGTAGTTCAGGGACAAGGCCAAAAGAAGGTGCTACTGTCATGATTTTTTTTGCTAATTTCTTTATATATATGATATTGGTAATCTTGAGGTGCATATGGGTTTATATTTGTTTCCTCTATTATATTCTTTTGGTAGGAATAGCACCTTCTTGA 966 0.4048 MEMNSNASGSAMVLETLRSRGWCLEETDQLKAIIVIQSALAIDRSKLVDSVESELLNSDLRSIGAKSFPESSLLRNPSSSYLHGPKILQISSVRDISKNSVDDISKNSGGRRLLRLCLTDGHSEITAIEYSHIPFIPDNVVPGTKIRLDNKVVVHSGIACLNPKVLTVLGGVVQSLYEEWQMNQKYSGFSRSSLRKLEDHDTGGPPPFVKLQAGSSSGYADYKARSNKPITMVGEPEMRPTGIQQNPNQKADILDVNLKSKLPTERAEDKPSSSGTRPKEGATVMIFFANFFIYMILVILRCIWVYICFLYYILLVGIAPS. 322
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca6g00922 321 SMART DUF1767_2 14 105 IPR033472 -
Seca6g00922 321 Pfam RecQ mediated genome instability protein 42 98 IPR013894 -
Seca6g00922 321 Pfam RecQ mediated genome instability protein 106 181 IPR013894 -
Seca6g00922 321 Gene3D - 59 189 IPR042470 -
Seca6g00922 321 PANTHER SURVIVAL OF MOTOR NEURON-RELATED-SPLICING FACTOR 30-RELATED 15 268 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca6g00922 Seca-Chr6 32120844 32125134 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca6g00922 K18404 - gmx:100782461 400.208
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Seca6g00922 6 32120844 32125134 Seca6g00922 6 32120844 32125134 ECH