Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca6g00840 ATGAGCAGCAACTCTCCTCTTTTTATTCTTTATTATTTTCCTCATCGTCCTTTGAATGAACCTAACCTATTCTCAATCTCAGGAAATGGGTTATGTAAGGTAAGAAAATCAAAACCAAGAGCATTATCAATGTCTCTCGGAAACAGCAATAACATTAATAAGAAGGTGGAAACAAGTGAAAGGCTCTATCTCGGGTTGGACTTTGGCACTTCTGGTGCCAGGTTTGCCATTATTGACAAGGGTGGCACAATTCACGCTGAGGCAAAGAGACCGTATCCACTATACTCGAGTGGAGAGTCATATGACTGGGTACGCTCATGGAAGGAGACACTATTTTCATTGCTTGAAGATGTTCCACTTGATCTTCGTAAACACATTGTGTCCATTTCTATTGATGGGACTTCTGCAACTACTATCATTGTTGATAGTGACACGGGAGAACCATTGTGGAGACCTTTTCTTTACAATGAGAGTTGTCCTGATGCGCTACCGATTGTAAAATCTATTGCTCCTCCTAACCACACAGTTTGCTCTGGAACGTCCACTCTGTGTAAGCTCATCTCATGGTGGAGTAATGTTGGTTCAGACAAGAAATCTGCCCTGTTGTTGCACCAAGCTGATTGGCTTTTGTGGCTTCTTCATGGAAAGCTTGGAGTTTCAGATTATAATAATGCTCTGAAGGTTGGCTATGATCCTGAAGTAGACTCATATCCATCATGGCTTGTCTCTCAACCATATTCTCATCTTTTACCTTCAGTTGTTGCGCCGGGAACCCCAATTGCTTGTTTAAAGGAGGAAGTTACAAATAAATTTGGCTTTCAAAAGGATTGTGTTGTATGCTCTGGAACTACTGACAGTATAGCTGCATTTCTTGCAGCTCGTGCTACTCAACCTGGGAAAGCTGTAATTTCTTCCCAAGCTTATCTTTTGTTTTAA 936 0.4135 MSSNSPLFILYYFPHRPLNEPNLFSISGNGLCKVRKSKPRALSMSLGNSNNINKKVETSERLYLGLDFGTSGARFAIIDKGGTIHAEAKRPYPLYSSGESYDWVRSWKETLFSLLEDVPLDLRKHIVSISIDGTSATTIIVDSDTGEPLWRPFLYNESCPDALPIVKSIAPPNHTVCSGTSTLCKLISWWSNVGSDKKSALLLHQADWLLWLLHGKLGVSDYNNALKVGYDPEVDSYPSWLVSQPYSHLLPSVVAPGTPIACLKEEVTNKFGFQKDCVVCSGTTDSIAAFLAARATQPGKAVISSQAYLLF. 312
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca6g00840 311 PANTHER SUGAR KINASE 62 304 - -
Seca6g00840 311 FunFam D-ribulose kinase 59 288 - -
Seca6g00840 311 SUPERFAMILY Actin-like ATPase domain 62 290 IPR043129 -
Seca6g00840 311 Gene3D - 58 309 - -
Seca6g00840 311 Pfam FGGY family of carbohydrate kinases, N-terminal domain 62 291 IPR018484 GO:0005975|GO:0016301
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca6g00840 Seca-Chr6 28712650 28716653 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca6g00840 K22935 - gmx:100779892 462.611
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Seca6g00840 6 28712650 28716653 Seca6g00840 6 28712650 28716653 ECH