Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca6g00838 ATGGCAGGAGGACGACGCTATGCGAGTGACGGGACGAGCTGGACGAGCGACGTTGTGCGAACAGCGGTGCTGTGCGGCGACGCTGGGACTAGTGGCGTGGCTGGGCTGAGGCCTAAGTGCTGCACTGCTGCTGCTACGAGAAACTGTGCTGTGGAAGCCCACGTGGCAGTGCAACAGCAACAGGAGAAGAAGGAGGAAGTGGCTAACAATAAAACTGCAAGTGATTCCTCCACCACCAACAACAAAGGGTTTGTTTTAAGTAGTGGAAAATTGGAGGATCGCCGTTCACATGGTAATGATCAGTGGAAGAGGAAGGAGAAAGAACAAGCAGCACTCGCTAAGTGTGGCCGTTTCATGAACAACAACCACCAATCAAGGAGGGCTTTTGCTTTTCTCTCTGATCATCAGAGGAATAAACGACGTCGTTCTGAAACGTTTCCCGTGCGGCGTGATGGAGATGAAACGACTGTCATGATTAGGAATATCCCTAGCAAATACACTAGAAATATGCTAGTGGAGTTCTTGGAAAACCACTGCAAGCGGGAGAATGAGAAAGAGAAAGAAGCTTGCGCTGAGAATATTGGAGAAGAAAAAATTTTACTAGCTTTTGATTTTGTTTATTTGCCTATAGATTTCAGAAGTGGGTTGAACAAGGGGTATGCATTTGTGAATTTCACAAAGGCGAAGGCAGCTTGGAAGTTTCGGTCAACAGCCTCTGGTATGAAATGGGACTTGTTTCAGTCTCACAAGATACGTGATGTCGTTGCTGCACGTCTCCAGGGAAAGGAGAAATTAGAGAGCCACTTTGAAACCATGAATTTTCCTTGCTATTTAGAGGAAGTTCTTCCTATCAGCTTCAGCCCTCCACGGGATGGTGTAGTGAAGGGAAGTGAAAAGACAATGGGGAGGCTCATCAACCGTCTTTGA 927 0.4736 MAGGRRYASDGTSWTSDVVRTAVLCGDAGTSGVAGLRPKCCTAAATRNCAVEAHVAVQQQQEKKEEVANNKTASDSSTTNNKGFVLSSGKLEDRRSHGNDQWKRKEKEQAALAKCGRFMNNNHQSRRAFAFLSDHQRNKRRRSETFPVRRDGDETTVMIRNIPSKYTRNMLVEFLENHCKRENEKEKEACAENIGEEKILLAFDFVYLPIDFRSGLNKGYAFVNFTKAKAAWKFRSTASGMKWDLFQSHKIRDVVAARLQGKEKLESHFETMNFPCYLEEVLPISFSPPRDGVVKGSEKTMGRLINRL. 309
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca6g00838 308 SUPERFAMILY RNA-binding domain, RBD 125 243 IPR035979 GO:0003676
Seca6g00838 308 MobiDBLite consensus disorder prediction 59 106 - -
Seca6g00838 308 MobiDBLite consensus disorder prediction 71 86 - -
Seca6g00838 308 MobiDBLite consensus disorder prediction 88 106 - -
Seca6g00838 308 Pfam RNA recognition motif 2 198 269 IPR007201 -
Seca6g00838 308 Gene3D - 50 264 IPR012677 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca6g00838 Seca-Chr6 28564385 28569347 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca6g00838 - - lang:109353064 230.335
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Seca6g00838 6 28564385 28569347 Seca6g00838 6 28564385 28569347 ECH