Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca6g00836 ATGAGCTACACGTTTATGTTTCTATCAGTTGCAACTTCCAATATGGTTGCTACTGCCCTTGCTAAACAGGATAGAGAAGAAGTGCAGCATCACATATCTGTCTTGCTTTTTGTTGGGTTAGCTTGTGGCTTCATGATGCTTTTGTTCACAAGGCTATTTGGTGCAGCAACACTCACTGCTTTCACTGGGCCAAAGAATGTACATATAGTACCTGCTGCTAACACTTATGTACAGATTCGAGGCTTGGCATGGCCTGCTTTGCTTGTTGGATGGGTTGCTCAGAGTGCAAGTCTTGGTATGAAAGATTCCTGGGGACCCTTGAAGGCTTTGGCTGCTGCTAGTGTTATAAATGGCATTGGTGATATACTTTTATGCACCTATTTAGGCTATGGAATTGCAGGGGCTGCATGGGCCACAATGGCATCACAAGTTGTTGCAGGTTATATGATGATGCAAACTCTAAACAAGAAGGGATTCAATGCATTTACCCTCTCTATTCCTTCGAGGAAGGAACTGCTGATGATACTCGGGCTTGCTGCTCCTGTATTTATGACAATGATGTCAAAGGTGGCTTTCTACTCATTACTCATATATTTTGCTACATCAATGGGTACACATACAATGGCTGCTCATCAAGTCATGGTCCAAACCTTTTGCATGTGTACAGTATGGGGTGAACCTCTCTCCCAAACTGCTCAATCATTTATGCCTGAATTGATATATGGAGTTAATCGGAGTTTGCCGCAGGCCCGATTGCTCCTAAGGTCTCTTGTGATAATTGGAGCTGTACTTGGATTGTTGTTAGGGATTGTTGGAACATCAGTTCCTTGGTTTTTTCCCTACGTTTTTACATGTGATCAGATGGTCATCCAGGAGATGCATAAGGTGGTGATTCCGTACTTTGTAGCACTGGCTGTGACACCCCCTACTCACAGCCTGGAGGGAACATTGCTGGCTGGAAGGGATCTAAGATATATAAGTTTGTCAATGAGTGGATGCCTTTGCGCGGGTGCACTTGTATTAATGATCTTGAGTAGCAGATACGGTTTGTCAGGCTGTTGGTTTGCCCTCGCAGTATTTCAGTGGGCTCGGTTTTCATTGGCCCTCCAGCGCCTGCTTTCTCCCAATGGCATTTTATACTCTGAAGATATGGACCGCTATAAGCTGCAAAAGCTAAAGACTGCTTAG 1188 0.4444 MSYTFMFLSVATSNMVATALAKQDREEVQHHISVLLFVGLACGFMMLLFTRLFGAATLTAFTGPKNVHIVPAANTYVQIRGLAWPALLVGWVAQSASLGMKDSWGPLKALAAASVINGIGDILLCTYLGYGIAGAAWATMASQVVAGYMMMQTLNKKGFNAFTLSIPSRKELLMILGLAAPVFMTMMSKVAFYSLLIYFATSMGTHTMAAHQVMVQTFCMCTVWGEPLSQTAQSFMPELIYGVNRSLPQARLLLRSLVIIGAVLGLLLGIVGTSVPWFFPYVFTCDQMVIQEMHKVVIPYFVALAVTPPTHSLEGTLLAGRDLRYISLSMSGCLCAGALVLMILSSRYGLSGCWFALAVFQWARFSLALQRLLSPNGILYSEDMDRYKLQKLKTA. 396
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca6g00836 395 PANTHER PROTEIN DETOXIFICATION 44, CHLOROPLASTIC-RELATED 1 377 IPR044644 -
Seca6g00836 395 Pfam MatE 5 119 IPR002528 GO:0015297|GO:0016020|GO:0042910|GO:0055085
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca6g00836 Seca-Chr6 28546503 28551952 Dispersed/Proximal
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca6g00836 K03327 - gmx:100778835 649.432
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Seca6g00836 6 28546503 28551952 Seca6g00836 6 28546503 28551952 ECH