Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca6g00816 ATGGTTGATCTCCATAACCTGATTTGTCAAACCTGTAACAACGTGGGTGTTGGTGATGGTTCTGATGGCTTCTTCTACTGCCTTCGGTGCGGCTCTCAGTATGAGGATGTCATGGATACCGCCGTTGATGATAATGATCTCTTCAACAAGGGAGGAGAGACTGGTGGTGGTGCTGTCTACTTGGCCAGTCACCAACGCCAGCGACCTGTTGCCATCAAAGTCGAACCCATCTCTCAATATGACTCCTTTTACGATTCACAGTCCAATTTCATTAGGAATCTGGGGTTAGAAGATGAAACTCTTCATGGTCAAGTAAAAAAAGAGGATATTGACACTAACTACTTTGATGGGGCAAGTCCCTCGGTTCCTGCTGATTTTGGAGGCTCTAAAGTTGCAAGCTTTGAAGACTACCACAACGAGATAAGGATGCGGTATGTGATGGGGTTGCAGATTATGATTGAGCTTCAATGTGAAGCGTTGGTGAAGGAGTTTAAGGTTACCCCTTTAATATGTGGCTTGGTTGGGCCAATTTGGTTGAGGTTTGTTTCCAGGACTGGTGTTTTTGATGATGACTGGGCTGATAAAGCAATCCATGACTCTGAAATGCAGAAAGAAGGGGAAGCAGATGTTTATAAGCCACGTACTGAATTCAGAGCAGAACCCCATAATATGTTTGGTCAGCGAGCTGTGATGATATGGTTTAGGTCTTTAAAGAAAAGGATTCCGCTAGCTTGTACTGTTGCTGTTTCATTTCTTGCATGTCATGTTGCCAGGGAAGCTGTTCTGCCATCTGACATGATGAAATGGGCTCGTGAAGGGAAGCTTCCATATTTTTCTGCTTTTGTTGAAATTGAAAGGCGCATGGGACATCCATCAAGTGCATGTCCTATCAGTTCAAGTATCATGTTTCGGCCTCAGCGAGCTATTTCAGTACAGAAGCTAGAGTCATTTGCCGCATCCATTGCTCATTTCATAGGCTTGGAATTACCTCCTGTGAACTTCTATGCAATAGCATACCGTTATCTTGAAAAATTATCTCTTCCTGTAGCACAGATCCTTCCTTATGCATGCCGCATATATGAATGGTCAATGCCTCCAACTTTGTGGTTATCCTTATCCACAGATTATTTTAAGCTACCTACTCACGTTGGCGTTGTATCAATTCTGGTAGTTGCTATAAGGATTTTGTATAACATAAATGGATTTGGAGAATGGGAGAAAAGTTTGTCCTGTAATGATGGTGCCAAAGTCACTGGTGAAATGGGTACTGCTTTTTCCTCCCATGATACACATGATTTTGGTAAAGATTCTGCTGAAGATCCAGTAGGACCTCAAAAACATAAATTGGATGCTGCAGGGCTTCTCCAACACCTTCAAGCGAGATATAATGAGATTGCAGATACTGATGAGTATTCAAAGGACTTGCCTACATATCTCAAATACTGTAGGGATGTTGTCTTTGCTGGATCAGAATCATCTTATGGGAATCATGAGGAAGAAAATATGATAGAACACCTGTGGAATTTTTATCAGAATGAAGAGGATACTAAACCATCAGAACCTGTGGAGAAATCCAATACTTCTTTTAAGAAAACAAAGTTGAGGGAGGAAGAATGCATTAGGAGGACATCTAAGGAGGAAAAGATGAGAAAAGAATATTTTACTGAACCCTCTCCTGATGATGGCACCTGCCTTGCAGATGACTTGCCTGGAAGTACATGTGATAATTCCTCTGAGAGTTTACCAAATGGTGAAGACTCGGATTCCCATGAACACAGTTCAGAAAAATCTTGTGTTAAGGAAGCCATTAGAAGGATGAAATTAGAAATGGAGGAAAACAGATTTTGTTATATACCACCTAGTGTCAGGTTGAAAAGACTTGATTACCTTCATTATGTCAGAAAGAGGGCTGAAGGTGCCCTGACTTATGTTGCTCATGCTGATTATTATATTTTGCTTCGGGCTTGTGCCAGGGTTGCTCAAGTTGACATTCGGATTTTGCATATTGGTGTGTTGAGCCTTGAGAAAAGACTTGCTTGGTTGGAGAAGCGGATTGATCAATGCTTGTATTCCAAACCTCCCAAGGTTTCTTGTCAGTTTTGTAGTGATAAGACCACTGAAAATGGATCTGATGATACACCTGGACCATCAAATTTGAATACTTGA 2166 0.416 MVDLHNLICQTCNNVGVGDGSDGFFYCLRCGSQYEDVMDTAVDDNDLFNKGGETGGGAVYLASHQRQRPVAIKVEPISQYDSFYDSQSNFIRNLGLEDETLHGQVKKEDIDTNYFDGASPSVPADFGGSKVASFEDYHNEIRMRYVMGLQIMIELQCEALVKEFKVTPLICGLVGPIWLRFVSRTGVFDDDWADKAIHDSEMQKEGEADVYKPRTEFRAEPHNMFGQRAVMIWFRSLKKRIPLACTVAVSFLACHVAREAVLPSDMMKWAREGKLPYFSAFVEIERRMGHPSSACPISSSIMFRPQRAISVQKLESFAASIAHFIGLELPPVNFYAIAYRYLEKLSLPVAQILPYACRIYEWSMPPTLWLSLSTDYFKLPTHVGVVSILVVAIRILYNINGFGEWEKSLSCNDGAKVTGEMGTAFSSHDTHDFGKDSAEDPVGPQKHKLDAAGLLQHLQARYNEIADTDEYSKDLPTYLKYCRDVVFAGSESSYGNHEEENMIEHLWNFYQNEEDTKPSEPVEKSNTSFKKTKLREEECIRRTSKEEKMRKEYFTEPSPDDGTCLADDLPGSTCDNSSESLPNGEDSDSHEHSSEKSCVKEAIRRMKLEMEENRFCYIPPSVRLKRLDYLHYVRKRAEGALTYVAHADYYILLRACARVAQVDIRILHIGVLSLEKRLAWLEKRIDQCLYSKPPKVSCQFCSDKTTENGSDDTPGPSNLNT. 722
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca6g00816 721 MobiDBLite consensus disorder prediction 548 596 - -
Seca6g00816 721 PANTHER TATA BOX-BINDING PROTEIN-ASSOCIATED FACTOR RNA POLYMERASE I SUBUNIT B 7 702 IPR033599 GO:0001164|GO:0001188|GO:0006360|GO:0070860
Seca6g00816 721 Pfam Zinc-finger of RNA-polymerase I-specific TFIIB, Rrn7 5 35 IPR021752 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca6g00816 Seca-Chr6 27910258 27913831 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca6g00816 - - gmx:100789168 1134.78