Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca6g00800 ATGGAAATCTGTGGAACCACATCTTTGACGTGGTCTCACACCGTCTGTCCATCTCTTCACCTTCCACGACCCCACTTGACCAGGGATACTATTGCTAGGAGGTTCAGGGTTTGGTGTGCCTCTGATCAGAGCTCCAAGGGAAATAAAATGATCATATCTGTAACTGGAGCAACGGGTTTTATAGGCAGAAGGTTGGTGCAAAAGCTGCATGCAGAAAATCATAGTGTTCATGTCTTGACACGCTCTAAATCTAAAGCAGAACTAATTTTTCCGGTGAAAGACTTTCCAGGAATCAAGATTGCGGAGGAGCCAGAATGGAAAGATAGCATTCAGAGCTCAACTGGGGTAGTGAATTTGGCTGGAATGCCCATAAGCACCAGATGGTCTTCTGAGATAAAGAAAGAAATCAAGCAGAGCCGGATTAGAGTGACCTCAAAAGTTGTAGAATTGATAAACAGTGTACCAGATGATATTCGACCTAAAGTTTTGGTTAGTGCAACAGCCGTTGGTTACTATGGCACCAGTGAGACACAAGTCTTTGATGAGCAAAGTCCATCAGGAAATGATTACTTGGCTGAGGTTTGTAGAGAATGGGAATCAACAGCCCTAAGGGCAAATGGAGATGTTAGAGTGGCTCTTATTCGCATTGGGGTTGTTCTCGGTAAAGATGGTGGAGCATTAGGTATGAACTTTAACTACATACTTCTACAGTTCTGCCCTTGTGAATTTATTATTTGA 738 0.4322 MEICGTTSLTWSHTVCPSLHLPRPHLTRDTIARRFRVWCASDQSSKGNKMIISVTGATGFIGRRLVQKLHAENHSVHVLTRSKSKAELIFPVKDFPGIKIAEEPEWKDSIQSSTGVVNLAGMPISTRWSSEIKKEIKQSRIRVTSKVVELINSVPDDIRPKVLVSATAVGYYGTSETQVFDEQSPSGNDYLAEVCREWESTALRANGDVRVALIRIGVVLGKDGGALGMNFNYILLQFCPCEFII. 246
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca6g00800 245 Pfam NAD dependent epimerase/dehydratase family 52 223 IPR001509 -
Seca6g00800 245 Gene3D - 45 241 - -
Seca6g00800 245 PANTHER SUGAR NUCLEOTIDE EPIMERASE RELATED 37 229 - -
Seca6g00800 245 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 47 226 IPR036291 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca6g00800 Seca-Chr6 27101827 27107912 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca6g00800 K07071 - gmx:100814881 399.823
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Seca6g00800 6 27101827 27107912 Seca6g00800 6 27101827 27107912 ECH