Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca6g00795 ATGAGTTTTGAATGCGTTGCAGCTGACTACAAGAACGAAGCAGAAGTTGGAGAGGCGCTTAAAGAGGCTTTTGATAGTGGCCTTGTGAAAAGAGAGGAACTTTTCATTACCACCAAGCTTTGGAATTCTGATCATGGACACGTTGTTGAGGCCTGTAAAGACAGTCTCAAGAAGCTTCAATTAGATTATCTGGATTTATATCTTGTTCACTTTCCTGTAGCTACAAGGCATACTGGGGTTGGTACTACTGATAGTGCTTTGGGTGAGGATGGAGTCCTGGACATAGATACAACCATATCCCTGGAAACTACCTGGCATGCTATGGAAGATCTTGTTTCATTGGGCTTGGTTCGCAGCATAGGAATCAGCAACTACGATATATTTCTGACTAGAGATTGTTTAGCATATTCCAAGATAAAGCCTGCTGTAAATCAGATTGAAACTCATCCATACTTCCAGCGTGACTCTCTAGTTAAATTTTGTCAGAAGCATGGGGTTTGTGTCACAGCCCACACTCCACTAGGAGGTGCTGCAGCAAACACAGAATGGTTTGGTTCAGTTTCATGTCTGGATGACCAAGTTCTCAAAAGTCTGGCTGAAAAGTACAAAAAGACTGCTGCCCAGATTGCTCTTCGCTGGGGCATTCAAAGGAACACTGTGGTCATCCCTAAAACATCAAAACTTGAGAGATTGAAAGAGAACTTCCAGGTATTTGATTTTGAGTTGTCTAAAGAGGACATGGAGCTCATCGGAAGTATGGACAAGAAGTATCGAACTAATCAACCAGCCAAATTTTGGGGCATAGATCTTTATGCATGA 819 0.4237 MSFECVAADYKNEAEVGEALKEAFDSGLVKREELFITTKLWNSDHGHVVEACKDSLKKLQLDYLDLYLVHFPVATRHTGVGTTDSALGEDGVLDIDTTISLETTWHAMEDLVSLGLVRSIGISNYDIFLTRDCLAYSKIKPAVNQIETHPYFQRDSLVKFCQKHGVCVTAHTPLGGAAANTEWFGSVSCLDDQVLKSLAEKYKKTAAQIALRWGIQRNTVVIPKTSKLERLKENFQVFDFELSKEDMELIGSMDKKYRTNQPAKFWGIDLYA. 273
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca6g00795 272 PANTHER 2,5-DIKETO-D-GLUCONIC ACID REDUCTASE 6 266 IPR020471 GO:0016491
Seca6g00795 272 FunFam NADP-dependent D-sorbitol-6-phosphate dehydrogenase 2 269 - -
Seca6g00795 272 PIRSF AKR 2 271 IPR020471 GO:0016491
Seca6g00795 272 Pfam Aldo/keto reductase family 10 252 IPR023210 -
Seca6g00795 272 Gene3D - 6 269 IPR036812 -
Seca6g00795 272 ProSitePatterns Aldo/keto reductase family signature 2. 108 125 IPR018170 GO:0016491
Seca6g00795 272 PRINTS Aldo-keto reductase signature 108 125 IPR020471 GO:0016491
Seca6g00795 272 PRINTS Aldo-keto reductase signature 54 72 IPR020471 GO:0016491
Seca6g00795 272 PRINTS Aldo-keto reductase signature 142 171 IPR020471 GO:0016491
Seca6g00795 272 PRINTS Aldo-keto reductase signature 189 213 IPR020471 GO:0016491
Seca6g00795 272 SUPERFAMILY NAD(P)-linked oxidoreductase 7 262 IPR036812 -
Seca6g00795 272 ProSitePatterns Aldo/keto reductase family putative active site signature. 222 237 IPR018170 GO:0016491
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca6g00795 Seca-Chr6 26961243 26964545 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca6g00795 - - gmx:100806500 499.975
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Seca6g00795 6 26961243 26964545 Seca6g00795 6 26961243 26964545 ECH