Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca6g00768 ATGGCCAAGAAACCTGGACCAAGACCCAGTAAATTATCTGTGTACTTATACATTCCTAATATCATTGGATACATGCGGGTTCTTTTAAACTGTCTTGCCTTCTCCCAATGTTTAACAAACAAAATCGTTTTCTCTGTTCTCTACTTTTTCAGCTTTGTATGCGATGCTGTGGATGGCTGGTGTGCTCGCAAATTCAATCAAGTGTCAACCTTTGGAGCTGTGCTGGACATGGTAACAGATAGGCCTGGCCTGATCTTCTTGTCGTTGCTTGCCTTAGATATTGCCAGCCACTGGCTGCAGATGTACAGCACTTTCTTGTCAGGCAAGGCTAGTCATAAAGATGTTAAAGACAGCAGCAATTGGCTTTTCAAGGCATATTATGGAAATAGAATGTTTATGGCTTACTGTTGTGTTTCATGTGAGGTTCTTTACTTACTCCTATTTTATCTTTCGGAGAATCAAACAGAGAAATTGATGGATGTTCTATCAAGTAATTTGCAAAAGATGTCATTGATTTCTTTCCTAATTGGTACTAGTTTATTTGGATGGGCAATCAAGCAGGTTATAAATATCATTCAGATGAAGACTGCAGCTGATGTATGTGTGCTTTATGACATCGACAAAAAACACAAGCACTGA 639 0.3912 MAKKPGPRPSKLSVYLYIPNIIGYMRVLLNCLAFSQCLTNKIVFSVLYFFSFVCDAVDGWCARKFNQVSTFGAVLDMVTDRPGLIFLSLLALDIASHWLQMYSTFLSGKASHKDVKDSSNWLFKAYYGNRMFMAYCCVSCEVLYLLLFYLSENQTEKLMDVLSSNLQKMSLISFLIGTSLFGWAIKQVINIIQMKTAADVCVLYDIDKKHKH. 213
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca6g00768 212 ProSitePatterns CDP-alcohol phosphatidyltransferases signature. 58 80 IPR000462 GO:0008654|GO:0016020|GO:0016780
Seca6g00768 212 Pfam CDP-alcohol phosphatidyltransferase 17 101 IPR000462 GO:0008654|GO:0016020|GO:0016780
Seca6g00768 212 PANTHER PHOSPHATIDYLINOSITOL SYNTHASE 10 209 - -
Seca6g00768 212 PIRSF CDP_diag_ino_3_P 1 212 IPR014387 -
Seca6g00768 212 Gene3D - 9 193 IPR043130 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca6g00768 Seca-Chr6 25811861 25817250 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca6g00768 1 211 Lipid Metabolism Gene Families AT1G68000 69.027 1.49e-118 334
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca6g00768 K00999 - gmx:100797963 383.645