Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca6g00766 ATGGCCATTCAAGCACACTCCAATCTGAACAACCCTCCCTTTCCAGCTTATGTCCAAACTATCTATGCCAATGGTCTCAAACAACTTCAAGAACAACAGAGAGAACAAACACATCAGCTTATTAGACAAGGCACTTTTGATCCCAATCTCCTTCAAGATTCAAATCAATTGCAAAATTCAAATGTCTTGAACTCTCCTCCTACCATTGCTCTTCAACTTGAGAAGCAATGGGATGAGATTGATCAGTACATCAGATTTCAGCAGAATGAGCAATTGAGATTGGAGATACAAGAGCATGGAAAGCAAAATGTGGCAGTATTACTTCAAAATGTGGAGTCTCATTCACTTCAGATGCTGAGGGAAAAGGATGAACAAATTGCACAAGCTGCAAGGATAAGGACAGAGTTGGAAGAAACTTTAAGGAAACTAGAGGCAGAGAATCAGGCATGGAGGAAAGTGGTTGAGGAAAAAGAGAACATAACATTGGCCCTTTTGAATACATTGGAGGAAGAGAGGAGATTGAGAGGTTTCTGTGGGGTGGCAAATGAAGCAGAGTCACTCTGTGATATAACAAGAGGAAGAGGAAAAGGAAAAGAGAAAGAAGAGGAAATTGAACAAATTAGGAGAGAAGGGATGCTTTGTAAAAGGTGTCATTCTCGAAGGTCGAGCTTTTTGTTCCTTCCATGCAGGCACCTTTCTTCATGCAATGCTTGTAATGCATTTCTCGAGGCATGCCCTGTCTGTGGGATGCAAAAGAAGGCTACCATTGAGACTCTGATTTTCTAG 786 0.4135 MAIQAHSNLNNPPFPAYVQTIYANGLKQLQEQQREQTHQLIRQGTFDPNLLQDSNQLQNSNVLNSPPTIALQLEKQWDEIDQYIRFQQNEQLRLEIQEHGKQNVAVLLQNVESHSLQMLREKDEQIAQAARIRTELEETLRKLEAENQAWRKVVEEKENITLALLNTLEEERRLRGFCGVANEAESLCDITRGRGKGKEKEEEIEQIRREGMLCKRCHSRRSSFLFLPCRHLSSCNACNAFLEACPVCGMQKKATIETLIF. 262
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca6g00766 261 PIRSF SBP1_RNase_bind 1 261 IPR017066 -
Seca6g00766 261 PANTHER SBP (S-RIBONUCLEASE BINDING PROTEIN) FAMILY PROTEIN 60 257 IPR017066 -
Seca6g00766 261 Pfam Zinc finger, C3HC4 type (RING finger) 212 251 - -
Seca6g00766 261 Coils Coil 119 160 - -
Seca6g00766 261 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 191 260 IPR013083 -
Seca6g00766 261 SUPERFAMILY RING/U-box 209 252 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca6g00766 Seca-Chr6 25724102 25725428 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca6g00766 K19042 - gmx:100789863 197.978