Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca6g00753 ATGGCATCCAAGAGAATCCTCAAGGAGCTCAAGGACTTGCAGAGAGACCCCCCAACTTCATGCAGTGCAGGCCCTGTGGGGGAGGATATGTTCCATTGGCAAGCAACCATCATTGGTCCAAATGACAGTCCCTATGCTGGTGGCGTTTTCCTTGTGACCATTCATTTCCCTCCTGATTATCCCTTCAAACCTCCCAAGGTTGCATTCAGGACCAAGGTATTCCATCCCAACATTAACAGCAATGGCAATATTTGCCTTGACATACTCAAAGAACAGTGGAGTCCTGCTCTCACCATATCCAAGGTCATGATGTTTGTGAACCCTTCCTCATTGATGCCATTATTTTCTTTCTTTTTGTTTTATATAAATACTGATTGA 378 0.4471 MASKRILKELKDLQRDPPTSCSAGPVGEDMFHWQATIIGPNDSPYAGGVFLVTIHFPPDYPFKPPKVAFRTKVFHPNINSNGNICLDILKEQWSPALTISKVMMFVNPSSLMPLFSFFLFYINTD. 126
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca6g00753 125 Gene3D Ubiquitin Conjugating Enzyme 1 115 IPR016135 -
Seca6g00753 125 ProSiteProfiles Ubiquitin-conjugating (UBC) core domain profile. 1 125 IPR000608 -
Seca6g00753 125 Pfam Ubiquitin-conjugating enzyme 5 106 IPR000608 -
Seca6g00753 125 SUPERFAMILY UBC-like 2 106 IPR016135 -
Seca6g00753 125 ProSitePatterns Ubiquitin-conjugating (UBC) active site signature. 74 89 IPR023313 -
Seca6g00753 125 PANTHER UBIQUITIN-CONJUGATING ENZYME E2 2 106 - -
Seca6g00753 125 FunFam Ubiquitin-conjugating enzyme E2 8 1 113 - -
Seca6g00753 125 CDD UBCc 3 116 IPR000608 -
Seca6g00753 125 SMART ubc_7 4 124 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca6g00753 Seca-Chr6 25102284 25103327 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca6g00753 2 104 Miscellaneous Gene Families AT3G17000 37.037 3.72e-18 76.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca6g00753 K06689 - gmx:100787053 220.705
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Seca6g00753 6 25102284 25103327 Seca6g00753 6 25102284 25103327 ECH