Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca6g00722 ATGGGTAGTACCGAAGATCCCAACCACACACCTGATTCTGTACACGAGTCTTCTGCATCACAACCCTTCCTCTCAAAGCCCTCATACCCAATCGAAGAACACGATTCTCATGATTCAGAGTCAAACCAACAATACCTTCACATCTCTTACAATCATGGCCCTCGCTCCTTCAAGGACCTTCCTTTCCTCATCCTCTTCCTTCTCTTTCTTCTCTCCACCTTCGCCTTTGGAATCTTCTCCATCTTCCACAGGAACACCAACTACTCCACCCTCTCTTCTTACACCTACGATTCCAACACTACCTCTTGTGTCAAGACTCAATTTTCCACATCTTCCCCCAACTGGGTATGGCTCGATTCTTCATCTTCTGACCCCCTTGTGAAGGATTTGATATGGACCCTCGTCATCACCTTCGTTATCAGCGTGCCCATGTGCTGGGCTCTGCTTCTCTTACTCAAGCATTACACCAAACAGATTGTGTACGCTTCAATTCCATTCTTCATCGTCATCCCCATTTTCCTCAACGTGTATTGGTTCGTTGCTTGCACTGTCAACACCTCCTGCGACGAGGTTTTCCCTCTGGCGTATAGGATTCTGGTGATGGTGTTCATTTTTTTGGTGATTGGTGTGATCGTGTGGATCTTGGTGGTGAATTGGCATCGGGTGGAGCTGACAGTGAGCATAATCGGGGTTGCTTCTGATGCGCTTTCTTGGAACCTGGGGTTGTTTGTGGTGCTACCTTGTTTGACCATTGGGCTTGTGGTGTATTATGTGCCGATCGTCATTTTCATGGTGTTTGCCAAGTTTAATGGGAAGATTGTGGCTAAGAATTTGCATGGTGAAGAATATGATTGTGTTTGGAAGGAGGACTCTTGGGTGCCAGCTTATTTTGCATTGGCAATTCTCACTATGTTGTGGTCTGCAGCAGCTATGTTGGAAGCACAAGTTTATGTCATTAGTGGAACTATTGCTCGTTGGTATTTCTCCAAGGAGAATGAAGCTCCTACAAGGAGTATTAGAACTTCTCTCAGGAAAGACATTAACTATGAGAATTTGGCTGGCAGAAATGCTTTTGGTCCTTCTTCTGGCACAATATGCTTGTCGGGATTGCTTATCTTTGTCGTTCGAGTGGTGCGTTCTGCAGTAGATAATGCAAGACAGGACGCTCCTGGGATAGTGAACCTTGTGTTGCGGTGCTGTGTAAATGCCTTGCTGACAGCAGTTGATTTTCTTAATAAGTTCACCATAAACTTTGCTGCAATAACTGGTGAAGCTTACTGCTCATCTGCAAGGATGACATATGAACTTCTAAGACGTAATCTTCTCTCTGCTGTTTTTGTGGAGACCATCTCATCTCGCCTCCTAGTTGGAATTGTCTTTGTCCTCTCAGCGATATACACAATTGTGGTCTGTGTTATCTTAAAAACTGGGACCAATCTTGGATCTGATTCATATTTTGTGGCTGCAATGGCATGGGCATTACTGCTAATAGTACTGGGTTTCCTCGTGCATGTGCTAGACAATGTAATTGACACAATCTATGTCTGCTATGCGATAGACCGGGACAGAGGAGAGGTTTGTAAACAAGATGTTCATGAGGTTTATGTTCATCTACCCATAAGTAGAAGTCTCAGACAATCTATTCCTACAAGAACTCTAGGTGTGTAA 1668 0.4454 MGSTEDPNHTPDSVHESSASQPFLSKPSYPIEEHDSHDSESNQQYLHISYNHGPRSFKDLPFLILFLLFLLSTFAFGIFSIFHRNTNYSTLSSYTYDSNTTSCVKTQFSTSSPNWVWLDSSSSDPLVKDLIWTLVITFVISVPMCWALLLLLKHYTKQIVYASIPFFIVIPIFLNVYWFVACTVNTSCDEVFPLAYRILVMVFIFLVIGVIVWILVVNWHRVELTVSIIGVASDALSWNLGLFVVLPCLTIGLVVYYVPIVIFMVFAKFNGKIVAKNLHGEEYDCVWKEDSWVPAYFALAILTMLWSAAAMLEAQVYVISGTIARWYFSKENEAPTRSIRTSLRKDINYENLAGRNAFGPSSGTICLSGLLIFVVRVVRSAVDNARQDAPGIVNLVLRCCVNALLTAVDFLNKFTINFAAITGEAYCSSARMTYELLRRNLLSAVFVETISSRLLVGIVFVLSAIYTIVVCVILKTGTNLGSDSYFVAAMAWALLLIVLGFLVHVLDNVIDTIYVCYAIDRDRGEVCKQDVHEVYVHLPISRSLRQSIPTRTLGV. 556
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca6g00722 555 MobiDBLite consensus disorder prediction 1 37 - -
Seca6g00722 555 PANTHER CHOLINE TRANSPORTER-LIKE (SLC FAMILY 44) 35 521 IPR007603 GO:0022857|GO:0055085
Seca6g00722 555 Pfam Plasma-membrane choline transporter 203 522 IPR007603 GO:0022857|GO:0055085
Seca6g00722 555 MobiDBLite consensus disorder prediction 1 25 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca6g00722 Seca-Chr6 24148037 24151704 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca6g00722 - - tpra:123913083 842.417