Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca6g00701 ATGGCATCATCAGATAAGGTGGTGGAAACTGTTATAGTTGGGAACTATGTAGAAATGGAAACTGAAGGAAAGCCAAAAGACATGAAATCCAGATTATCAAGCTTTTTGTGGCATGGTGGTTCTGCTTATGATGCTTGGTTTAGCTGTGCCTCCAACCAGGTGGCTCAAGTTCTGCTTACATTGCCATATTCATTTTCCCAACTGGGAATGCTCTCTGGCATACTTTTTCAACTCTTCTATGGGTTGCTTGGTAGCTGGACAGCTTACCTCATTAGCATACTATATGTTGAATACAGAACAAGAAAAGAGAGAGAAAAAGTTAACTTCAGGAACCATGTCATTCAGTGGTTTGAGGTGCTTGATGGACTCCTCGGGAAGCACTGGAGAAACGTGGGTTTGGCATTTAACTGCACATTTCTTCTGTTTGGATCTGTTATCCAACTGATAGCTTGTGCAAGCAACATATATTACATAAATGACAATCTGGACAAGAGGACTTGGACTTATATCTTCGGAGCTTGCTGTGCCACCACTGTCTTTATTCCTTCCTTTCATAACTACAGAATCTGGTCCTTTTTGGGCCTTGTCATGACCACATACACTGCTTGGTACCTCACTATTGCCTCTATCCTTCACGGCCAGGTGGAGGGAGTGAAGCATTCGGGTCCGACAAAATTGGTTCTATATTTTACTGGGGCCACAAACATTCTCTACACATTTGGGGGACATGCTGTTACTGTGGAGATAATGCACGCTATGTGGAAGCCTCAGAAGTTCAAGGCCATATACTTGCTTGCAACAGTGTATGTGCTGACACTGACTCTTCCATCTGCATCAGCTGTGTATTGGGCATTTGGAGACATGCTTCTAAATCACTCCAATGCTTTTGCTCTTCTCCCAAGATCACCCTTCCGTGACATGGCTGTCATTTTAATGCTCATTCACCAGTTTATAACATTTGGGTTTGCATGCACCCCATTGTACTTTGTGTGGGAGAAAGCAATAGGGATGCACGAATGCAAGAGCCTTTGCAAGCGTGCATTGGTGAGATTGCCAGTGGTCATACCCATATGGTTCTTGGCCATCATATTCCCTTTCTTTGGACCCATCAATTCCACCGTTGGATCTCTCCTTGTCAGCTTCACCGTTTACATCATCCCTGCCCTCGCTCACATCTTCACCTTCAAATCTTCCTCTGCTCGTCAGAATGCTGTGGAACAACCTCCCAAGTTTGTTGGAAGATGGGTAGGAACGTACATTATCAACGCATTTGTAGTGGTGTGGGTCCTTATTGTAGGGTTTGGATTCGGTGGGTGGGCCAGTATGGTGAACTTCATACACCAAATTGACACCTTTGGACTCTTCACAAAGTGTTACCAATGCCCACCACCAACACCTCATCAGCTGAATGCCACTGCACCTTCACCTCTTCACCACCCTCATGCCCACTGA 1452 0.4497 MASSDKVVETVIVGNYVEMETEGKPKDMKSRLSSFLWHGGSAYDAWFSCASNQVAQVLLTLPYSFSQLGMLSGILFQLFYGLLGSWTAYLISILYVEYRTRKEREKVNFRNHVIQWFEVLDGLLGKHWRNVGLAFNCTFLLFGSVIQLIACASNIYYINDNLDKRTWTYIFGACCATTVFIPSFHNYRIWSFLGLVMTTYTAWYLTIASILHGQVEGVKHSGPTKLVLYFTGATNILYTFGGHAVTVEIMHAMWKPQKFKAIYLLATVYVLTLTLPSASAVYWAFGDMLLNHSNAFALLPRSPFRDMAVILMLIHQFITFGFACTPLYFVWEKAIGMHECKSLCKRALVRLPVVIPIWFLAIIFPFFGPINSTVGSLLVSFTVYIIPALAHIFTFKSSSARQNAVEQPPKFVGRWVGTYIINAFVVVWVLIVGFGFGGWASMVNFIHQIDTFGLFTKCYQCPPPTPHQLNATAPSPLHHPHAH. 484
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca6g00701 483 Pfam Transmembrane amino acid transporter protein 38 431 IPR013057 -
Seca6g00701 483 PANTHER OS05G0424000 PROTEIN-RELATED 44 427 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca6g00701 Seca-Chr6 23582831 23587385 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca6g00701 1 482 Organic Solute Cotransporters AT2G21050 86.929 0.0 876
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca6g00701 K13946 - gmx:100812002 957.207