Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca6g00692 ATGCTAAAGGAGATGGGTTCTCAGTGCTCCAAACAGATAGAGAGACGAAAAGCAATCCACACAGAGAAGAAAACTCTTTCTGATCTTAAAACCTCTGGAGAAGACTATCCTGGCTCTGATTACCACCCTTCAGATAGAAAAAACTGGATGTCAGGTCTCAACCCTGAGAAAGTTAAGATCAACATGATTGTTTGGCCAGGAACCCATGATTCTGCAACCAACAAAATTGGCATCCCATGCATCACTCGCCCTTTTGCTCAATGCCAATCTTTGTCCATCTACAAACAGCTTGTGAGGGGCACAAGGGTTCTTGACATTAGGGTGCAAGAAGATCGCAGGGTGTGCCATGGAATCCTCCTCACATATAGCATAGATGTTGTCATCAAAGATATCAAGAAGTTCTTATCAGAAACTGAGTCTGAGATCATCATCCTTGAAGTTAGAACCGAGTTTGGCCATGAGGATCCACCAGAATTTGAAAAGTACCTAGAGGAACAACTTGGTGAGTACCTGATTCCACAGGGTGATGATGTTTTTGAGAAGACCATTGCAGAGTTGTTACCAAAGAGGGTTATATGTGTTTGGAAACCAAGAAAATCACCACAGCCTAAGGCAGGGAGTCCCCTTTGGAGTGCAGGGTATCTAAAGGATAATTGGATCAACACAGATTTGCCATCAACAAAATTTGAGAGTAATCTGAAGCATTTGAGTGAACAGCAACCTGTGATGTCGAGAAAGTACTTTTATAGAGTGGAGAACACTGTTACACCTGTGCCTGATAACCCAATTCTGTGTGTGAAACCTGTAACTGAACGCATTCATGGCTATGCAAGGCTCTTCATTAGTCAGTGCTTCTCCAAAGGGTGTGTTGATAGATTGCAGATTTTTTCTACCGATTTTATAGACCTGGATTTTGTTGATGCATGTGTTGGACTCACTCATGCAAGGATTGAGGGTAAAGCCTGA 966 0.4265 MLKEMGSQCSKQIERRKAIHTEKKTLSDLKTSGEDYPGSDYHPSDRKNWMSGLNPEKVKINMIVWPGTHDSATNKIGIPCITRPFAQCQSLSIYKQLVRGTRVLDIRVQEDRRVCHGILLTYSIDVVIKDIKKFLSETESEIIILEVRTEFGHEDPPEFEKYLEEQLGEYLIPQGDDVFEKTIAELLPKRVICVWKPRKSPQPKAGSPLWSAGYLKDNWINTDLPSTKFESNLKHLSEQQPVMSRKYFYRVENTVTPVPDNPILCVKPVTERIHGYARLFISQCFSKGCVDRLQIFSTDFIDLDFVDACVGLTHARIEGKA. 322
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca6g00692 321 SMART plcx_3 66 195 IPR000909 -
Seca6g00692 321 Pfam Phosphatidylinositol-specific phospholipase C, X domain 84 178 IPR000909 -
Seca6g00692 321 MobiDBLite consensus disorder prediction 20 43 - -
Seca6g00692 321 CDD PI-PLCXDc_plant 36 316 - -
Seca6g00692 321 Gene3D Phosphatidylinositol (PI) phosphodiesterase 45 313 IPR017946 GO:0006629|GO:0008081
Seca6g00692 321 PANTHER UNCHARACTERIZED 35 314 - -
Seca6g00692 321 SUPERFAMILY PLC-like phosphodiesterases 45 312 IPR017946 GO:0006629|GO:0008081
Seca6g00692 321 ProSiteProfiles Phosphatidylinositol-specific phospholipase X-box domain profile. 60 188 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca6g00692 Seca-Chr6 23099613 23100578 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca6g00692 5 321 Acyl Lipid Metabolism Gene Families AT4G38690 78.616 0.0 529
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca6g00692 - - gmx:100789013 581.252