Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca6g00673 ATGGGGGTTTCGGAGAATTGGAAGGGGTTGATACTGGCGGTGTGTTCCAGTGCATTCATTGGTGCAAGCTTCATCTTAAAGAAGAAAGGTCTTAAGCGTGCTGCTGCCCGTGGTACTCGTGCAGGAGTTGGCGGTTATACTTATCTACTAGAGCCACTTTGGTGGGCTGGCATGGTGATGAGTAAGTTTAGCAAGTTTGCTTTCTTTCTCTGGTGCTATTTGCTTACAGTGATTACTGGGGAGGCTGCAAATTTTGTGGCTTACATCTATGCTCCAGCAGTTCTGGTTACTCCCCTTGGTGCGCTTAGTATTATTGTCAGTGCTGTTTTGGCTCACTTCTTGTTGAAGGAGAGGCTTCAGAAGATGGGGGTGTTGGGATGTGTGTCCTGCATTGTGGGATCAATTGTTATTGTCATCCATGCACCACAAGAGCATACTCCAAATTCTGTCCAAGAAATATGGGATCTGGCCACTCAACCAGCATTTCTAGTTTATGTGGTGGCAACAGTTTCAGCTGTTTTGGCCTTGATTTTACACTTTGACCCTCGCTATGGACAGACTAATATGCTGGTCTACTTGGGAATTTGTTCATTAATGGGCTCCCTCACGGTTGTGAGCATAAAGGCCATTGGAATTGCAATAAAGCTTACACTTGATGGAATAAGTCAAGTAGCTTATCCTCAGACTTGGTTTTTTTTTGCAGTGGCCACAATATGTGTCATTACACAGTTGAATTACCTTAACAAGGCTCTGGATACGTTCAATGCAGCAATTGTTTCTCCTGTATATTATGTAATGTTCACAACTCTCACTATTATTGCCAGTGCAATAATGTTTAAGGATTGGTCTGGTCAGGATGTCACCAGCATAGCCTCTGAGATATGTGGATTCATCACCGTTCTTTCAGGAACAATCATATTGCATGCAACTAGAGAACAGGAAGAATCTAATATGCAAGGGACCTTGACATGGTACATCGGTGATGATACAAAGAAGTGCATTGAAGATGAACACCTGATCCTTATACACGGTTCCGATTATCATGATCGTTAA 1053 0.4311 MGVSENWKGLILAVCSSAFIGASFILKKKGLKRAAARGTRAGVGGYTYLLEPLWWAGMVMSKFSKFAFFLWCYLLTVITGEAANFVAYIYAPAVLVTPLGALSIIVSAVLAHFLLKERLQKMGVLGCVSCIVGSIVIVIHAPQEHTPNSVQEIWDLATQPAFLVYVVATVSAVLALILHFDPRYGQTNMLVYLGICSLMGSLTVVSIKAIGIAIKLTLDGISQVAYPQTWFFFAVATICVITQLNYLNKALDTFNAAIVSPVYYVMFTTLTIIASAIMFKDWSGQDVTSIASEICGFITVLSGTIILHATREQEESNMQGTLTWYIGDDTKKCIEDEHLILIHGSDYHDR. 351
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca6g00673 350 Pfam Magnesium transporter NIPA 69 312 IPR008521 GO:0015095|GO:0015693|GO:0016020
Seca6g00673 350 Pfam Magnesium transporter NIPA 6 67 IPR008521 GO:0015095|GO:0015693|GO:0016020
Seca6g00673 350 PANTHER UNCHARACTERIZED 5 317 IPR008521 GO:0015095|GO:0015693|GO:0016020
Seca6g00673 350 SUPERFAMILY Multidrug resistance efflux transporter EmrE 48 140 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca6g00673 Seca-Chr6 22147680 22151699 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca6g00673 K22733 - gmx:100817349 537.724