Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca6g00670 ATGGCAGCAGAGTCAAACGCTGGTTTTCACAATCAAGATATAGATTTGAGTCGGCATGCAATATCATTTCAACCTGGTGCTATTAATAGCTTGTCCGAGATGGTTCCAATGGGTAATTATTTTGGGTTAAGTAGTTCTTCTGGGATGATATATTCTGGGAATTCAACCATCCTTAACAGCAACCCTGTCATAAGTCAAGCTGGTAATCCATCTAGTTCTTCTCTTCTTCTTGATTCAGTCCCAGGGCTGAAGCATGACACAGGGTTGGCTGTTGAGTGGTCTATTGATGAACAGTACAAATTGGAGGAGGGCCTTGCCAAATATGCTGATGAGCCAAGTATCATGAGGTATATAAAAATTGCTGCCACATTGCCTGATAAAACAGTTCGTGATGTTGCTTTGAGGTGTAGATGGTTGACTAGAAAGCGAAGGAAACCAGAAGAACACAGTCTGGGAAAGAAGGTCAATAACAGAAAGAACCAGTATTCTAAAGTCATACTTCTTCAGGATAAGCCATTGGAGTCAGCATCCAAGACAAATTTGCATTCAGCTCTGCCCCCAAGCATGGGTTCATATTCTCACATGTCACACCATATGGACCAAAGACAACGGATACCATATGATGGCTGTGGAGCAGTAGCCTACTCGGTGTTGGATTGCTCCACTTATTGTGGCAACACCAGAATTTGTGGTCCCATGAAGCAACTCATGGAGCAGAATGCTCAAGCTTTCAGTCAAATCAGTGCCAATTTATCTACTTACAAGTTGCAGGATAACATTGACCTCTTTCGCCACACAAGGCACAATATTAGTACCATTCTTAATGACATGAGACAGATGCCTGGCATTATGAGCCAAATGCCACCACTGCCTGTTATGATTAACGAGGATCTTGCAAATAGTATTTTTCCTAGTAGAACATAG 924 0.4221 MAAESNAGFHNQDIDLSRHAISFQPGAINSLSEMVPMGNYFGLSSSSGMIYSGNSTILNSNPVISQAGNPSSSSLLLDSVPGLKHDTGLAVEWSIDEQYKLEEGLAKYADEPSIMRYIKIAATLPDKTVRDVALRCRWLTRKRRKPEEHSLGKKVNNRKNQYSKVILLQDKPLESASKTNLHSALPPSMGSYSHMSHHMDQRQRIPYDGCGAVAYSVLDCSTYCGNTRICGPMKQLMEQNAQAFSQISANLSTYKLQDNIDLFRHTRHNISTILNDMRQMPGIMSQMPPLPVMINEDLANSIFPSRT. 308
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca6g00670 307 SUPERFAMILY Homeodomain-like 81 147 IPR009057 -
Seca6g00670 307 Gene3D - 91 140 - -
Seca6g00670 307 Pfam Protein of unknown function (DUF3755) 253 286 IPR022228 -
Seca6g00670 307 PANTHER FINGER CCCH DOMAIN PROTEIN, PUTATIVE (DUF3755)-RELATED 49 304 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca6g00670 Seca-Chr6 21978955 21985879 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca6g00670 - - gmx:100807371 448.358