Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Seca6g00664 ATGAATAATAAGAAAGAGAAAGAGGAAGTTAAAAGGTGGATAGAGGGAGATGAAAGTGGGTGGGAGATGCTACGAAGGATGCAGAGTGTGCGACCTTTCTTGCTTCCTCCGCCGCTTCACAGGGTTCCTCTCCGCGTCGGCAACGTCCTTGAGCTCGTCGGTCCCTCTCCTTCTGCCAAAACACAAATTCTCATTCAGGTTGCAATCAATTGCATTCTCCCCAAAGAGTGGAATGGGGTACACTATGGAGGCTTCGACCATTTGGTACTCTTTCTTGACCTCGATTGTCGCTTCGATATTATGCGTTTCTCCCAATTGCTCATTCATCGGATCATGCAACCTCACCCTCACTCTCTCCCCCACGGGGAAGCTATTGAAGATTATGATAAAACGTTATACGATTTGTGCATGTCCCGTTTCTTGTATGTCCGTTGTTCCGACAGTTTTGAATTTCTTCAGACTCTCAAGATGTTACATTGTCGCTTAAAAAAGGAGGAAGAAGCTCATGGAGTTAGTGTTCACCTGCTCATGATTGACAGCATTGGAGCTTTTCATTGGATGGATCGTGCATCTATGTTCTTGTCTCTAAAAGAAAACAACAGGAAAAAACTTTTCCTTCAAAGTGTGTCAGAAGCTGTAGTTCAGGACATTAAAAAACTTGTTCAGGTTCATCCTATGCTTGTTATAGCTACAAAGTCAGTGATTTTTGGGAATAGATATTCGACAGCTTCAATCGAGATCAAAGGGAATTTTACAAAAAACAGTTGGGAAGAAAGATGTTCAAGAAATGCAACAAGAAGCCATCAACATTTTCAATATCGTGAGTACATGCCTTCTGTCTGGCAGTCCTTTGTTACACACAGAATACTTGTACGTTCTTCAGATGATCATTCTGTTCATCATAACTCCTCATTCTATTTGTTGGAATGGTTATTGCCAAGATTGAGTTTTGCAGACAAGATTGTAGTGAAAGATGTAAGAACATTATGTGTGGAACATGGTTTTTAA 1008 0.4127 MNNKKEKEEVKRWIEGDESGWEMLRRMQSVRPFLLPPPLHRVPLRVGNVLELVGPSPSAKTQILIQVAINCILPKEWNGVHYGGFDHLVLFLDLDCRFDIMRFSQLLIHRIMQPHPHSLPHGEAIEDYDKTLYDLCMSRFLYVRCSDSFEFLQTLKMLHCRLKKEEEAHGVSVHLLMIDSIGAFHWMDRASMFLSLKENNRKKLFLQSVSEAVVQDIKKLVQVHPMLVIATKSVIFGNRYSTASIEIKGNFTKNSWEERCSRNATRSHQHFQYREYMPSVWQSFVTHRILVRSSDDHSVHHNSSFYLLEWLLPRLSFADKIVVKDVRTLCVEHGF. 336
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Seca6g00664 335 Gene3D - 41 308 IPR027417 -
Seca6g00664 335 CDD XRCC2 47 292 - -
Seca6g00664 335 ProSiteProfiles RecA family profile 1. 24 234 IPR020588 GO:0003677|GO:0005524|GO:0006281|GO:0140664
Seca6g00664 335 PANTHER DNA REPAIR PROTEIN XRCC2 11 330 IPR030547 GO:0000724|GO:0005657|GO:0006281|GO:0033063
Seca6g00664 335 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 44 196 IPR027417 -
       

Duplication type information


Select Gene Chromosome Start End Duplicated_type
Seca6g00664 Seca-Chr6 21661141 21672447 Wgd
       

Pathway information


Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca6g00664 K10879 - gmx:100807727 455.292