Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca6g00646 ATGGCTTCCGTACCGTCGAAAACCCTACTGGATATGTTCCAGCCAGCTTCGAAGCGTTTGAAACCCACTCTCTGTAAATCCGAAGATGCCAATGGCTCCGCACTTTCTGTGGAACAAAAATCGCGCATCGAATACAACAAGCTTCTCGCTAAGTCCAAGAGGAACCTCAAAATCTGCGTCGAAAGGCTCTCCAATTGCAAAGCCGCAGGGGGCAACGATTGCGTGAAACTTGAGGAGTTACTGGTGGAGGAATCGTGGTTGGAAGCTCTCCCTGGAGAACTTCAGAAACCCTATGCCGTTACTCTTTCCAAATTCGTTGAAACAGAGATTTCCAGCGGCGATGTGTATCCTCCAACGCAATTGATTTTCAACGCTCTTAACTCTACCCCTTTTCATGCTGTTAAGGCTGTGATCCTTGGCCAGGTTGTACCTGAGGGAATCAAAATTCCTTCCAGTTTGGTAAATATATTTAAGGAACTTAAGCAAGACCTTGGCTGCGCGATTCCATCTCATGGGAATCTAGAAAAGTGGGCTGTACAGGGTGTTCTCTTACTCAATGCTGTTCTCACAGTCAGGAAGCATCAAGCAAATTCTCATGCAAAAAAAGGCTGGGAACAATTTACTGATGCTGTTATCAAGACAATCTCACAGAAAAAGGAAGGGGTCGTGTTTCTGTTATGGGGAAACTCCGCTCGGGAGAAATCTAGGTTAATTGATGCAACAAAGCATCACATTCTAACAGCTGCACATCCTTCTGGTTTGTCTGCAAATAGAGGCTTCTTTGGCTGCAGGCACTTCTCTCGCACTAACCAACTTTTGGAGCAAATGGGGATTGATCCCATAGATTGGCAACTATAA 858 0.4557 MASVPSKTLLDMFQPASKRLKPTLCKSEDANGSALSVEQKSRIEYNKLLAKSKRNLKICVERLSNCKAAGGNDCVKLEELLVEESWLEALPGELQKPYAVTLSKFVETEISSGDVYPPTQLIFNALNSTPFHAVKAVILGQVVPEGIKIPSSLVNIFKELKQDLGCAIPSHGNLEKWAVQGVLLLNAVLTVRKHQANSHAKKGWEQFTDAVIKTISQKKEGVVFLLWGNSAREKSRLIDATKHHILTAAHPSGLSANRGFFGCRHFSRTNQLLEQMGIDPIDWQL. 286
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca6g00646 285 Gene3D - 62 285 IPR036895 -
Seca6g00646 285 PANTHER URACIL-DNA GLYCOSYLASE 20 285 IPR002043 GO:0004844|GO:0006281|GO:0006284
Seca6g00646 285 SMART UDG_2_a 127 273 - -
Seca6g00646 285 NCBIfam uracil-DNA glycosylase 84 277 IPR002043 GO:0004844|GO:0006281|GO:0006284
Seca6g00646 285 SMART UDG_2 127 273 IPR005122 -
Seca6g00646 285 SUPERFAMILY Uracil-DNA glycosylase-like 80 285 IPR036895 -
Seca6g00646 285 Pfam Uracil DNA glycosylase superfamily 152 272 IPR005122 -
Seca6g00646 285 CDD UDG-F1-like 98 283 IPR002043 GO:0004844|GO:0006281|GO:0006284
Seca6g00646 285 Hamap Uracil-DNA glycosylase [ung]. 83 284 IPR002043 GO:0004844|GO:0006281|GO:0006284
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca6g00646 Seca-Chr6 19622907 19627814 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca6g00646 K03648 - gmx:100818241 477.633