Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca6g00644 ATGTCAGATCTTGAGGCCCCCTTGCGACCAAAGAGGAAGAAGATTTGGGTGGACTACTTTGTTCAGTTTCGATGGATAATTGTTATTTTCGTGGTCCTTCCCATTTCCTTCACCATTTATTTCCTCACATACCTTGGTGATGTGTGGTCAGAGTGGAAGTCCTTTAAGACCCGTCAGAAGGAACATGATGAGAATGTCCAGAAGGTTATCAAACGTCTCAAACAGAGGAATCCATCAAAGGATGGTCTTGTCTGTACTGCTCGTAAGCCCTGGATTGCAGTTGGGATGCGGAATGTTGACTATAAGAGGGCTCGTCATTTTGAAGTTGATTTGTCTGCTTTCAGGAACATTCTTGAGATTGACAAAGAAAGAATGATTGCAAGAGTGGAGCCTCTAGTCAACATGGGGCAGATCACTAGGGTGACTGTACCCATGAATCTTTCCCTTGCTGTGGTTGCAGAGCTAGATGATCTTACTGTTGGTGGCCTCATTAACGGCTATGGGATAGAAGGAAGCTCCCACATTTATGGCCTATTTTCTGATACTGTTGTGGCCTTTGAAATTGTCTTGGCAGATGGCACTCTTGTTAGAGCCACCAAAGACAATGAGTACTCTGATCTATTCCATGCTATTCCGTGGTCTCAGGGAACACTTGGGCTTCTTGTTGCTGCTGAGATCAGGCTTATACCGGTCAAGGAGTACATGAAGCTAACCTATCAACCTGTTGTCGGTAACCTGAAAGATATTGCACAAGCATATTGTGATTCTTTTTGTCCCAGAGATGGAGACCAGGATAATGAAGAGAAGGTTCCAGACTTTGTTGAAACAATGGTTTATTCACCAACACAAGCTGTGTGCATGACAGGGAAATATGCTTCAAAAGAAGAGGCCAAGAAGAAGGGGAATAAGATTAACAGTGTTGGATGGTGGTTCAAACCCTGGTTCTATCAACATGCAGAGACAGCACTGAAGAAAGGATTGTTTGTAGAATACATTCCTACCAGAGAATATTATCACAGGCATACAAGGTGTTTGTATTGGGAGGGAAAGCTTATCCTCCCATTTGCTGATCAATGGTGGTTTAGGTTTCTTTTTGGCTGGCTGATGCCACCCAAGGTTTCTCTACTCAAGGCAACTCAAGGCGAAGCCATAAGAAACTATTACCATGAAATGCATGTCATCCAGGACATGCTTGTTCCTTTGTACAAGGTGGGAGATGCATTAGAATGGGTTGACCGTGAGATGGAGGTATACCCCATTTGGCTCTGTCCACACAGAATGTTCAAGCTGCCTGTCAAAACTATGATTTACCCAGAACCAGGCTTCGAACTGCATCGCAGGCAGGGAGACACACAAACTGCTCAAATGTACACAGATGTTGGAGTTTACTATGCACCAGGTCCTGTTTTAAGGGGTGAGGTATTTGATGGTGCAGAAGCAGTGCGTCAAATGGAGAACTGGTTGATTGAAAATCATGGTTATCAGCCACAGTATGCTGTGTCTGAGCTGTCTGAGAAAAACTTCTGGAGGATGTTTGATGCTGGTCTATATGAGCATTGTAGGAGGAAGTATGGAGCTGTTGGGACCTTTATGAGTGTGTACTACAAATCAAAGAAGGGCAGGAAAACTGAGAAGGAGGTGCAGGAAGCAGAGCAAGCACACCTTGAAACTGCATATGCAGAAGTTGATCAACCAGCAGACTGA 1704 0.4431 MSDLEAPLRPKRKKIWVDYFVQFRWIIVIFVVLPISFTIYFLTYLGDVWSEWKSFKTRQKEHDENVQKVIKRLKQRNPSKDGLVCTARKPWIAVGMRNVDYKRARHFEVDLSAFRNILEIDKERMIARVEPLVNMGQITRVTVPMNLSLAVVAELDDLTVGGLINGYGIEGSSHIYGLFSDTVVAFEIVLADGTLVRATKDNEYSDLFHAIPWSQGTLGLLVAAEIRLIPVKEYMKLTYQPVVGNLKDIAQAYCDSFCPRDGDQDNEEKVPDFVETMVYSPTQAVCMTGKYASKEEAKKKGNKINSVGWWFKPWFYQHAETALKKGLFVEYIPTREYYHRHTRCLYWEGKLILPFADQWWFRFLFGWLMPPKVSLLKATQGEAIRNYYHEMHVIQDMLVPLYKVGDALEWVDREMEVYPIWLCPHRMFKLPVKTMIYPEPGFELHRRQGDTQTAQMYTDVGVYYAPGPVLRGEVFDGAEAVRQMENWLIENHGYQPQYAVSELSEKNFWRMFDAGLYEHCRRKYGAVGTFMSVYYKSKKGRKTEKEVQEAEQAHLETAYAEVDQPAD. 568
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca6g00644 567 SUPERFAMILY FAD-binding/transporter-associated domain-like 105 231 IPR036318 GO:0050660
Seca6g00644 567 Pfam FAD binding domain 109 198 IPR006094 GO:0050660
Seca6g00644 567 MobiDBLite consensus disorder prediction 545 567 - -
Seca6g00644 567 FunFam delta(24)-sterol reductase 118 289 - -
Seca6g00644 567 PANTHER 24-DEHYDROCHOLESTEROL REDUCTASE 1 554 IPR040165 -
Seca6g00644 567 ProSiteProfiles PCMH-type FAD-binding domain profile. 45 231 IPR016166 GO:0071949
Seca6g00644 567 Gene3D - 110 231 IPR016169 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca6g00644 Seca-Chr6 19576576 19580018 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca6g00644 K09828 - gmx:100814521 1115.14