Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca6g00617 ATGGCGACAACATCATTTTATGGCTTGCAAATTCCATTGTCAAGATCATGCCTTCCTTCATCACAAAGGATTACAGATGCGGGCGCTGTGGCTCTTGGTGGAAAGTCCAAGGTGGGATCATGGAATAAACTTGCAAGTGTCAGACATGTTACATCTGTGCAACCTTTCCAGCGGTGCTTTACATCATCGTCCACAAAACCTGTCAAAATTGTTACAAAGGCAATGTCTGAGTCTAGTGCAAAAAGTCCAGTTTCAGGATTGCCAATTGATTTGAAAGGTAAAAGGGCTTTTATTGCTGGTGTGGCTGATGACAACGGATATGGATGGGCAATTGCAAAATCTCTTGCTGCAGCAGGAGCTGAAATTCTTGTTGGCACATGGGTACCTGCTCTGAATATTTTTGAGTCCAGCCTACGACGTGGAAAATTTGATGAATCACGCGTATTACCCGATGGTTCATTGATGGAGATTACTAAAGTTTATCCCTTGGATGCAGTTTTTGACAATCCTGAGGATGTGCCCGAAGATATAAAAGCAAACAAGCGCTATGCTGGATCCGCTAAATGGACAGTTCAGGAAGTTGCTGAATCTGTTAAGGAAGACTTTGGCAGCATAGACATCCTTGTGCACTCACTTGCCAATGGACCAGAGGTTACCAAACCATTGTTGGAGACATCTCGGAAAGGATATCTTGCTGCAATATCTGCATCTAGTTACTCTTATGTTTCTTTACTGAAGCATTTTCTTCCAATCGTTAACCCAGGTGGATCTTCAATCTCTCTCACATACATTGCTTCGGAGAGGATCATTCCTGGATATGGTGGTGGTATGAGTTCTGCAAAAGCTGCACTCGAAAGTGATACACGAGTTCTTGCTTTTGAAGCGGGTAGAAAGCGCAAAATTAGAGTCAACACTATATCTGCAGGTCCGCTCAGAAGTCGTGCTGCAAAAGCAATTGGGTTCATTGATATGATGATTGATTATTCACTAGCCAATGCACCTCTACAGAAAGAACTATCAGCAGAGGAGGTGGGCAATGCAGCTGCATTCTTAGCATCACCTTTGGCATCTGCTATCACCGGTACTGTTCTTTATGTTGACAATGGTCTGAATGCTATGGGTGTTGGAGTTGACAGTCCAATATTTAAGGATCTTGACATTCCCAAGGACCAGCATTAA 1179 0.4326 MATTSFYGLQIPLSRSCLPSSQRITDAGAVALGGKSKVGSWNKLASVRHVTSVQPFQRCFTSSSTKPVKIVTKAMSESSAKSPVSGLPIDLKGKRAFIAGVADDNGYGWAIAKSLAAAGAEILVGTWVPALNIFESSLRRGKFDESRVLPDGSLMEITKVYPLDAVFDNPEDVPEDIKANKRYAGSAKWTVQEVAESVKEDFGSIDILVHSLANGPEVTKPLLETSRKGYLAAISASSYSYVSLLKHFLPIVNPGGSSISLTYIASERIIPGYGGGMSSAKAALESDTRVLAFEAGRKRKIRVNTISAGPLRSRAAKAIGFIDMMIDYSLANAPLQKELSAEEVGNAAAFLASPLASAITGTVLYVDNGLNAMGVGVDSPIFKDLDIPKDQH. 393
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca6g00617 392 Gene3D - 94 320 - -
Seca6g00617 392 PRINTS Glucose/ribitol dehydrogenase family signature 299 316 IPR002347 -
Seca6g00617 392 PRINTS Glucose/ribitol dehydrogenase family signature 277 296 IPR002347 -
Seca6g00617 392 PRINTS Glucose/ribitol dehydrogenase family signature 334 354 IPR002347 -
Seca6g00617 392 PRINTS Glucose/ribitol dehydrogenase family signature 203 214 IPR002347 -
Seca6g00617 392 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 92 374 IPR036291 -
Seca6g00617 392 Gene3D Enoyl acyl carrier protein reductase 321 378 - -
Seca6g00617 392 PANTHER ENOYL-[ACYL-CARRIER-PROTEIN] REDUCTASE 1 384 IPR014358 GO:0004318|GO:0006633
Seca6g00617 392 FunFam Enoyl-[acyl-carrier-protein] reductase [NADH] 322 377 - -
Seca6g00617 392 CDD ENR_SDR 93 374 IPR014358 GO:0004318|GO:0006633
Seca6g00617 392 FunFam Enoyl-[acyl-carrier-protein] reductase [NADH] 94 320 - -
Seca6g00617 392 Pfam Enoyl-(Acyl carrier protein) reductase 190 371 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca6g00617 Seca-Chr6 18671060 18676954 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca6g00617 1 386 Acyl Lipid Metabolism Gene Families AT2G05990 74.677 0.0 583
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca6g00617 K00208 - gmx:100785606 699.508
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Seca6g00617 6 18671060 18676954 Seca6g00617 6 18671060 18676954 ECH