Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca6g00597 ATGAGGAAGAAGAAACATGGGTTTAGGAGGCCTGTGGTCATCAAGAAGCCAAAGCAACCACAGGAGCAGCCCAGCGTGGATCCTATTACGGGAAAGAAGATCCCTAAAAGTTTTGTGTTTTCACGAGGGAAGTTGCCTGGTCCTCTCAAACAGCTTCAGATGGACCTCAGAAAGTTGATGCTGCCATATACTGCTCTCAGCCTAAGGGAAAAGAAGCGGAATAATCTGAGAGACTTTTTGAATGTTGCTGGACCTATGGGTGTCACACATTTCCTCATATTGTCAAAAACTGCAACTGCACCTTACTTGAGGGTTGCCACAACCCCACAAGGACCCACTCTTACGTTTAAGATACATGAATACTCGTTGGCAGCGGATATTGCCCGATCTCAATTGCATCCTCGATGCCCAAAAGATCTATTTAAAAATTCTGCTTTGATTGTGCTTTCTGGATTTGTGAGTAGAGATTTACATTTACAGCTTACAACTAACATGTTTCAGAATATTTTTCCAACAATTGATGTTAAAACTGTTAAACTATCCTCTTGCCAAAGGATCGTGTTGCTTAATTACAACAAGGACACTAAGCTCATTGATTTTCGCCATTATTCCATAAGATTACAGCCTGTAGGTGTTTCACGCAGAATTAGAAAACTTGTGCAGAGCCATCAGGTGCCTGATCTAAAGAATCTTCAAGACGTGAGTGATTTTGTCACAAAGGCTGGCTATGGATCAGAAAGTGAAGCAGATGAAGAAGCAGCAACAGTGACCTTGTCGAGTAATCTTGGTAGAGTTAACCGTGCTTCTACAAAAAGTGCTGTCAAACTTCAAGAGATTGGTCCCAGGATGACTCTTCAACTAGTTAAGGTTGAGAAGGGACTGTGTTCGGGTGAAGTCCTCTTCAGTGAATATGGAAAAGCTGGTGACAAAGGAAAAAGTGATGATGAGATGCAGGACAATGAGGATGGAGAAGATTCAGAAGGTAGTGAAGATGAAGATGAAGGAGGAGAAGATCCAGAGGACGGTGAAGATGATGAAGAACTTGATTAG 1050 0.4229 MRKKKHGFRRPVVIKKPKQPQEQPSVDPITGKKIPKSFVFSRGKLPGPLKQLQMDLRKLMLPYTALSLREKKRNNLRDFLNVAGPMGVTHFLILSKTATAPYLRVATTPQGPTLTFKIHEYSLAADIARSQLHPRCPKDLFKNSALIVLSGFVSRDLHLQLTTNMFQNIFPTIDVKTVKLSSCQRIVLLNYNKDTKLIDFRHYSIRLQPVGVSRRIRKLVQSHQVPDLKNLQDVSDFVTKAGYGSESEADEEAATVTLSSNLGRVNRASTKSAVKLQEIGPRMTLQLVKVEKGLCSGEVLFSEYGKAGDKGKSDDEMQDNEDGEDSEGSEDEDEGGEDPEDGEDDEELD. 350
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca6g00597 349 SMART Brix_2 38 290 IPR007109 GO:0006364|GO:0019843
Seca6g00597 349 PANTHER PETER PAN-RELATED 20 343 IPR045112 -
Seca6g00597 349 Pfam Brix domain 48 289 IPR007109 GO:0006364|GO:0019843
Seca6g00597 349 MobiDBLite consensus disorder prediction 304 349 - -
Seca6g00597 349 MobiDBLite consensus disorder prediction 318 349 - -
Seca6g00597 349 MobiDBLite consensus disorder prediction 1 30 - -
Seca6g00597 349 ProSiteProfiles Brix domain profile. 35 296 IPR007109 GO:0006364|GO:0019843
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca6g00597 Seca-Chr6 17742096 17747735 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca6g00597 K14859 - gmx:100800809 598.586