Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca6g00591 ATGAAGGGCGAGGTGAAGGGGCAACACAGAAGGGGGGAAAGGTTGATTAGAAGGGAGGAAAAGGGTGAAAAAAGGTTTAGGGTGAAGGGGGTGAAGAGCAAAGACAAGGATGACACTGAAAGAAAGAGAAAGTGCCAAAACCAAAAAGAAAAAGATCAGAAAATTCCCATTAGGTCCCATACTCTCTCCCCTTCTGGGCGAAGCCAAAGCCAAAGAGGCAAACAAAGGCAAAGAAGCCATTCTCACAAAAATCTTCTACTATTCTCTCTCTTTCAATCCCTTCAACTTCCTCACTCTCTGATTCTCTCCCTCCCTCTCTCAATTCTCGTTCCCCTTTCCTCCCTCCGCCGCGCCGCCGCTGATTCCCCGCCGAGATCCCCGCGGAGGCGCCGCGGGATTTTTCTAGGGTTTTCCGATTGTTCGTTCTTACTCCCGCTGTTCCCCAACGACACCGTTTTCCGATTCCAGCCATTCCGTAGCATCGACGAGCCGTCCATGGCTCCCGCGCGTCGACGCGGAGCGAACAAGGCCAAGGCGAATGGGCACTTGAGTTTGGGCGATCTCGTGCTCGCTAAGGTCAAGGGCTTCCCTGCTTGGCCTGCCAAGATAAGCAGACCTGAAGATTGGCAGAAGACCCCTGATCCAAAGAAATATTTTGTTCAGTTCTTTGGCACGAAAGAAATAGCTTTTGTTGCCCCTGCAGATATTCAGGTATTCACCAATGAGTTTAAAAATAAGTTGTCTGCTCGGCTTCATGGCAAAACAAAGTACTTTACCCAAGCTGTGAAGGAAATCTGCGCAGCTTTTGATGAGATTGAGAAACAAAAGGCTAGTGGTTTGACAGATGACACTGATGATTCTCGTATTGGTTCAGAGGCTCCTTCGGTTGATGGGGTAGTGTGTAGCTTAAAGGATGCCACTGATGCTGTGGGATCAAATGCTGAAAAAAATAACATCTATGTGGATAATGTTGGTTCTAATTTGGAGGACTGTACACAGAGAATTGGAGGAAGTGATAGCCAAGATGGAAAGGTCTCTGAATCTAGCCATCCAAATGAAGGCTCATCTGTTTTGTCGCCTGTGATCAAAAGTAAATTATCCAATGGTTCCGAGCTAAAGAAGAATGTTAGCAAATCTACTCTTAAAGGTGCAAGTAATGTTAATGATTTTGGGCAAGATGATAATGGACACAGTGTTTTAACAAATGGAAGCAAGCAAAGAAAGCTTGTTACTGGCTCAAAAAGGAGAAATGAAGCTTCAGATGATAAAAATAAAAATGGTGGATCATCTACTGGAAGATTTTTGAAGGAGGAAAATTCTACTGGTGGTGCTGATCTTTCCAGGTCTGGAGAGACGATAAAAGCTGGAAAAAAAAGGAAAAATGCATCTGCTGTTAAATCAGATTCTCCAGATACATTTAAATCAGACTCTAATGGTAATACTGGAGAAAAAAATAAGATCTTGATAACAACTAAAACAAGTCTTGAGGTAAAACATGAATCACAAGAGACAAATTTTGATTCGGAGAAGGCTGATGGCAAAAATTCTAGCATGGGAAAGAAGTCCCCACTTAATGCAAAGCATAATGTGGGAGCTAATGAATCTTTACATGCTACCAAGAAGTTGAAGCGTACAGATGCCAAAGATGATAAGGATGTGAAAAGTGGTTCGCCTGGCCCAACTGTTGAAGACAAAGCATTTAAAAAATTAGAGTTGAAAAGGTCCACGTCTAATTTAAAGACAGAAAAAAGCTTGCCATCAAGGGGCCAAATTGGTGTAGGTTCTGATGATTCTGGCCATGATTTGCCACCTGGGTCCAAACACCATAGACAAACTCAGCAAGCTATGCCTGATTCTGATAGCATTGCTTCTGATGAAAAAAAAGATCGGAGTACTCTTGGACTGAAAAGTGATACAAACAATGTTTTGACAAAACAAGTGCAGAAGAAACGTAGAGCTGTTTGCCTTTACGATGATGATGATGATGAACCTAAAACTCCTGTTCATGGAGGAGCAGTAAAAAATACTAAGTCACCTTTTGTTTCAGAGGTCAAGAAGAGCAACAATGCACACTCAGAGAAGTCTGATGTTGCTCAGCTGGCTCACAGAAATTATAATGAACTTGAGGATACCCATCTGAGAGAACCATCTTCTCAATTACATAGTGACCCTTCGTCAATTAAGCAGCCTCTTAAAGAGAAAGTTGATGAAGCCATTTCTGTGCATGTTTCTCATAGTCATGATAAACTAGATTCAAAGCAGTTTCCCTCTAAGGTGGCAAAATTAAGTGCTTCCTCCCCAGTAAACTCACCAAAGTCAGTTACAAAGTCAAATGCTGAGCGGAATAAGTCTTCCAAACCTTTGCTTAAAGTTTCCAGTAATAGTACTCAAAAGAAGGCTGATCATGGGTCTTCAAATTCAAAGTCTTCACTTAACCTTAGCTCTTCTCAGAATCAAGTTGCAACTCATAAAAAGAAGCTTGCATCCTCAGCAGAAATTTCTAAAACTACTCCAAAAAAATTGCCGCAGGCAGTTGAAGTTCCCGCTTCAACAGTTGGTTTTAAGGAGCCTGATACTCTGCATGCTGATAGATTGGAGGTCAATATGGAAGAAAAAAATAGTATATATACTGGTTCTGGGACTCCAGATTCTCCTAAAACTATGAAGCATCTTATTGCGGCTGCCCAAGCAAAAAGGAGATTAGCTCATGCTCAATGTCTTCCTTTTGGCATTCACAATATTCAGGGGGGGACGCCTAGCCCTTCCGCAGTTCAGCCAATTCTGTCTGCCTCAAGTAATTTTGTACAGAGAGATGTGCCGGGAGTTTATGAGAACCCAACATTGGCTTCTCCACCAACTAATGAGCATCCCTCTGCTTCTCGAAATCAACTTGAGGCTGATGAAATTGAGGAGAGAAGAGTTGGTTCAGTTCAAAGGGGTCTAGGAGGTTCGCTGAGTGGTGGTACAGAGGCATCTGTTGCTCGTGATGCTTTTGAAGGAATGATCGAAACTTTGTCACGGACCAAGGAAAGTATTGGGCGGGCAACTCGGCTAGCCATCGATTGTGCTAAATATGGCATTGCCAATGAGGTAGTTGAACTTCTCATCCGAAAGCTGGAAAATGAAACTAGTTTTCATCGCAAGGTGGATTTGTTTTTTCTTGTTGATTCCATCACCCAGTGCTCACATAATCAAAAGGGCATTGCTGGAGCCTCCTACATCCCTACAGTTCAAGCAGCATTGCCACGTCTTCTTGGTGCTGCTGCTCCCGCTGGGGCTAGTGCCCGTGAAAATCGTCGTCAGTGCCTCAAGGTTTTGAGGCTGTGGAGTGAGAGGAAAATTTTTCCTGAATCAGTTCTTCGTCGTTACATGGATGATATTGGAATTTCAAATGATGATATGACAGTTAGCTTTTCTCTCAGGCGTCCTTCTCGAGCAGAACGAGCTGTGGATGACCCAATTAGAGAAATGGAAGGCATGCTTGTTGATGAGTATGGAAGTAATGCTACATTTCAGCTGCCTGGCTTTTTATCTTCTCACGTGTTTGAAGAAGATGAAGATGAAGATGATTTACTGATGAATTCTTGTAAGGATTCATATGGTGCATCTCCAGCAAATCCCATACTTAACCTTGGAGAATCAGAAACTTCTACTGTTACCCCAAATGACAAGCGCCATTGCATCTTGGAGGATGTGGATGGTGAGCTAGAAATGGAAGATGTTTCAGGTCACCCAAAGGATGAAAGACCAGTATTTTTGAACAGTTCTGATGAAATCGATTTGCAGCCGCAGGGCTCAGATAGGAATTTAGATCCTTCTTCAAACATTTCAAAAGAGATGCCAGATACTCCAGAGGGTTCTCCTCCATTGCCACTTGATTCGCCTCCTCCGCCCCCACCTTTGCCTTCGTCACCTCCGCCACCTCCTCCTCCACTATCTCCATCTCCTCCCCCACCCCCACCACCTCCAATATTGCAACCCCCACCTCCTCCTTTGCCTCACTCAGCCCCTCCAGTGTCATTGATTCCTCAATCATCTGGACCACCTCGGCCTTCACTTCTCTCCCAATCATTGATTCCACCTCAGTCATCACATCAGTCATCCCCACAGATGGGGTATCAGCAAAATATACCTCATGACTTTAGTGGCACAACTAATGGTAACCAAATAGTTCAAATGGCTGGAAATTCTTTTTCTGGAGGTCACAGTAATGCAGTTGTCAAGAATGAAATATTTCCACAGTCGGCTGCTTTTGCCCCAACTGCAGGCTGCAGCTCCCAAGAACCTTCTGGTTTTAATCCTTCAAGGCAATTAGAATATGGACAAAAAGATGTGTATTTAAATGCTCAAGTTCCTCAACCTAACCATCAATATCAGCAGGGTAACCCCCCATTCTCCCAGAGACATGCACATCCTGCCCCACCACAAAATCCTCCAAATCAGTTTTCATATCCAAATCATACAGTTCAGCAACATCTTCCACATTCATTCCATCCTCCCTACCCTATTCCATCCATTCCAGATGGCCGGAGGCAATTTGTTGCTGATGAGCAATGGAGAATGCCATCCAATGAATTTAAAACAAACAGTCAACATGGTGTATGGGGAGGGAGAAATCCTTCATGCCCTGGTCCACCCTTCGGGCAAGAAGGTTATTTCCGACCACCACATGAAAGACCACCAGTAAGCAATGTAGGTTATCAGCAAGCAATTTCAAGCAACCTACCTGGTCCTCCAATATCAGGACATGGTGTTCCTCAGATGTTACCTTGTAGGCCAGACATTCCTGCTGTAAATTGTTGGAGACCCGCTTGA 4815 0.4386 MKGEVKGQHRRGERLIRREEKGEKRFRVKGVKSKDKDDTERKRKCQNQKEKDQKIPIRSHTLSPSGRSQSQRGKQRQRSHSHKNLLLFSLFQSLQLPHSLILSLPLSILVPLSSLRRAAADSPPRSPRRRRGIFLGFSDCSFLLPLFPNDTVFRFQPFRSIDEPSMAPARRRGANKAKANGHLSLGDLVLAKVKGFPAWPAKISRPEDWQKTPDPKKYFVQFFGTKEIAFVAPADIQVFTNEFKNKLSARLHGKTKYFTQAVKEICAAFDEIEKQKASGLTDDTDDSRIGSEAPSVDGVVCSLKDATDAVGSNAEKNNIYVDNVGSNLEDCTQRIGGSDSQDGKVSESSHPNEGSSVLSPVIKSKLSNGSELKKNVSKSTLKGASNVNDFGQDDNGHSVLTNGSKQRKLVTGSKRRNEASDDKNKNGGSSTGRFLKEENSTGGADLSRSGETIKAGKKRKNASAVKSDSPDTFKSDSNGNTGEKNKILITTKTSLEVKHESQETNFDSEKADGKNSSMGKKSPLNAKHNVGANESLHATKKLKRTDAKDDKDVKSGSPGPTVEDKAFKKLELKRSTSNLKTEKSLPSRGQIGVGSDDSGHDLPPGSKHHRQTQQAMPDSDSIASDEKKDRSTLGLKSDTNNVLTKQVQKKRRAVCLYDDDDDEPKTPVHGGAVKNTKSPFVSEVKKSNNAHSEKSDVAQLAHRNYNELEDTHLREPSSQLHSDPSSIKQPLKEKVDEAISVHVSHSHDKLDSKQFPSKVAKLSASSPVNSPKSVTKSNAERNKSSKPLLKVSSNSTQKKADHGSSNSKSSLNLSSSQNQVATHKKKLASSAEISKTTPKKLPQAVEVPASTVGFKEPDTLHADRLEVNMEEKNSIYTGSGTPDSPKTMKHLIAAAQAKRRLAHAQCLPFGIHNIQGGTPSPSAVQPILSASSNFVQRDVPGVYENPTLASPPTNEHPSASRNQLEADEIEERRVGSVQRGLGGSLSGGTEASVARDAFEGMIETLSRTKESIGRATRLAIDCAKYGIANEVVELLIRKLENETSFHRKVDLFFLVDSITQCSHNQKGIAGASYIPTVQAALPRLLGAAAPAGASARENRRQCLKVLRLWSERKIFPESVLRRYMDDIGISNDDMTVSFSLRRPSRAERAVDDPIREMEGMLVDEYGSNATFQLPGFLSSHVFEEDEDEDDLLMNSCKDSYGASPANPILNLGESETSTVTPNDKRHCILEDVDGELEMEDVSGHPKDERPVFLNSSDEIDLQPQGSDRNLDPSSNISKEMPDTPEGSPPLPLDSPPPPPPLPSSPPPPPPPLSPSPPPPPPPPILQPPPPPLPHSAPPVSLIPQSSGPPRPSLLSQSLIPPQSSHQSSPQMGYQQNIPHDFSGTTNGNQIVQMAGNSFSGGHSNAVVKNEIFPQSAAFAPTAGCSSQEPSGFNPSRQLEYGQKDVYLNAQVPQPNHQYQQGNPPFSQRHAHPAPPQNPPNQFSYPNHTVQQHLPHSFHPPYPIPSIPDGRRQFVADEQWRMPSNEFKTNSQHGVWGGRNPSCPGPPFGQEGYFRPPHERPPVSNVGYQQAISSNLPGPPISGHGVPQMLPCRPDIPAVNCWRPA. 1605
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca6g00591 1604 MobiDBLite consensus disorder prediction 942 968 - -
Seca6g00591 1604 Pfam CID domain 997 1121 IPR006569 -
Seca6g00591 1604 MobiDBLite consensus disorder prediction 1 79 - -
Seca6g00591 1604 MobiDBLite consensus disorder prediction 1257 1281 - -
Seca6g00591 1604 SUPERFAMILY Tudor/PWWP/MBT 178 273 - -
Seca6g00591 1604 ProSiteProfiles CID domain profile. 990 1131 IPR006569 -
Seca6g00591 1604 MobiDBLite consensus disorder prediction 451 465 - -
Seca6g00591 1604 SMART 558neu5 997 1128 IPR006569 -
Seca6g00591 1604 MobiDBLite consensus disorder prediction 331 408 - -
Seca6g00591 1604 MobiDBLite consensus disorder prediction 1256 1387 - -
Seca6g00591 1604 MobiDBLite consensus disorder prediction 1454 1497 - -
Seca6g00591 1604 FunFam Enhancer of ag-4 2 990 1133 - -
Seca6g00591 1604 MobiDBLite consensus disorder prediction 496 516 - -
Seca6g00591 1604 Pfam PWWP domain 186 269 IPR000313 -
Seca6g00591 1604 ProSiteProfiles PWWP domain profile. 185 242 IPR000313 -
Seca6g00591 1604 MobiDBLite consensus disorder prediction 758 837 - -
Seca6g00591 1604 MobiDBLite consensus disorder prediction 1 57 - -
Seca6g00591 1604 MobiDBLite consensus disorder prediction 1203 1225 - -
Seca6g00591 1604 PANTHER HEPATOMA-DERIVED GROWTH FACTOR-RELATED 166 1239 - -
Seca6g00591 1604 Gene3D - 989 1133 IPR008942 -
Seca6g00591 1604 MobiDBLite consensus disorder prediction 58 72 - -
Seca6g00591 1604 MobiDBLite consensus disorder prediction 1284 1345 - -
Seca6g00591 1604 MobiDBLite consensus disorder prediction 424 447 - -
Seca6g00591 1604 MobiDBLite consensus disorder prediction 466 495 - -
Seca6g00591 1604 MobiDBLite consensus disorder prediction 742 844 - -
Seca6g00591 1604 MobiDBLite consensus disorder prediction 331 703 - -
Seca6g00591 1604 MobiDBLite consensus disorder prediction 651 668 - -
Seca6g00591 1604 SMART PWWP_4 183 240 IPR000313 -
Seca6g00591 1604 MobiDBLite consensus disorder prediction 1209 1223 - -
Seca6g00591 1604 MobiDBLite consensus disorder prediction 687 703 - -
Seca6g00591 1604 Gene3D - 173 281 - -
Seca6g00591 1604 MobiDBLite consensus disorder prediction 1346 1387 - -
Seca6g00591 1604 MobiDBLite consensus disorder prediction 537 578 - -
Seca6g00591 1604 MobiDBLite consensus disorder prediction 712 731 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca6g00591 Seca-Chr6 17652285 17663304 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca6g00591 - - gmx:100800279 1647.48