Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca6g00588 ATGGAGAGGGAAGAGAGAGTGAGAAAGGCAGAGGCTTTGGTGGAGAAGGCGATGAAAGGGAACGATGCTTCTCACGATGCAGCGCATGTTTGGAGGGTTCGTGACCTTGCTCTTTCTCTTGCCTCCGAGGAAGGCCTCTCTTCTGACCCCAATTCCATGGAAATCGTAGAGCTTGCTGCACTGCTCCATGACATAGGTGACTACAAATACCTGAGGGATCCATCTGAGGAAAAAATTGTTGAGAATTTTCTTGAGGAAGAGGGAGTTGAGGAGAACAAGAAGTCAAAAATTTTGAAGATCATTAAAGGAATGGGTTTCAAAGAGGAAGTGACAGGAAATGCTAGTAGTGAATGGTTTCCCGAATTTGGAGTTGTTCAAGATGCTGATCGACTTGATGCTATTGGTGCTATAGGGATATTAAAATATAAATGGAACACCTCTTACTCTGTGCGGTGCTTCACCTTTGGTGGGAGCAGGAAGAGGGTGCTGCATGATCCTGCGATTCTACCACGATCTGATTTATCCAAGGAGCAATACATTAACAAAGAGGAACAAACTACCATTAATCATTTTCATGAGAAGCTTCTTAAGCTCAAAGATATGATGAAAACCAAGGCTGGGCAGAGGAGGGCTGAAAGAAGACACAAATTCATGGAGGAGTTTGTCAAAGAGTTTTATGACGAATGGAATGGTTTAAGCTAA 702 0.4345 MEREERVRKAEALVEKAMKGNDASHDAAHVWRVRDLALSLASEEGLSSDPNSMEIVELAALLHDIGDYKYLRDPSEEKIVENFLEEEGVEENKKSKILKIIKGMGFKEEVTGNASSEWFPEFGVVQDADRLDAIGAIGILKYKWNTSYSVRCFTFGGSRKRVLHDPAILPRSDLSKEQYINKEEQTTINHFHEKLLKLKDMMKTKAGQRRAERRHKFMEEFVKEFYDEWNGLS. 234
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca6g00588 233 Gene3D - 2 103 - -
Seca6g00588 233 SMART hd_13 22 143 IPR003607 -
Seca6g00588 233 CDD HDc 25 143 IPR003607 -
Seca6g00588 233 SUPERFAMILY HD-domain/PDEase-like 3 231 - -
Seca6g00588 233 Gene3D - 106 233 - -
Seca6g00588 233 PANTHER SUPERFAMILY HYDROLASE, PUTATIVE (AFU_ORTHOLOGUE AFUA_1G03035)-RELATED 1 231 - -
Seca6g00588 233 ProSiteProfiles HD domain profile. 26 134 IPR006674 -
Seca6g00588 233 Pfam HD domain 28 133 IPR006674 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca6g00588 Seca-Chr6 17575313 17581715 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca6g00588 K06950 - gmx:100500273 363.229