Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca6g00578 ATGCTGAGAAAACTGCTACACCAATCTCGCACCTTTCAATTTCATCGTCCCATCTCCAAAGCCTACTTTGCTGCACCTTCGCCACCACCATGTTATCGCTCCAACAGGCTTCTTTCTTCATCTTCTTCAATCTCCATCGACCGCTCTGGCCTTTACAACCCACCTGACCATTCTCACCAACCCACTTCCGATTCTGAGCTCGTCAACCACCTCAAAGGGATTATCAAGTTTCGTGGAGGTCCTATTTCATTAGGTGAGTACATGTCAGAAGTTTTGACAAATCCTAAATCTGGGTACTACATCAATCGAGATGTTTTTGGAGCACAAGGTGATTTTATCACCTCCCCTGAAGTGAGCCAGATGTTTGGTGAGATGATTGGTGTCTGGGTGATGTGTCTTTGGGAGCAAATGGGCCAACCACAAAAAGTAAATCTAATTGAGCTAGGTCCAGGACGAGGAACTCTTATGGCTGATCTTCTTCGAGGTACTTCAAAATTTAGGAACTTCATTGAGTCATTGCATGTACACCTGGTGGAGTGTAGTCCAGCTCTACAGAAGCTTCAGCACCAGAACTTGAAGTGCATTGATGAAGAGAATGCAGCTCAAGATACTGATAAAAGAACTGTGAGCTCTTTGGTTGGTGCTCCTGTATCATGGCATGCTACACTGGAGCAGGTTCCTTCAGGATTGCCAACAATTATCATTGCTCATGAGTTCTTTGATGCCCTACCAGTCCATCAATTTCAGAAAGCATCTCGTGGCTGGTGTGAGAAAATGGTTGATGTGGCGGAAGATTCATCGTTCCAATTTGTTCTATCTCCACATCCTACACCTGCTACTCTCTATCTATTGAAGCGGTGCAAGTGGGCCGCACCTGAGGAGATCGCTGAACTCAATCAAATTGAAGTTTGCCCCAAAGCTATGGAGTTGACTCAGACCATTGTTGAAAGGATAAGTTCTGATGGTGGTGGAGCTCTAATCATTGACTATGGCTTGGATGGAGTAATCTCCGACAGTCTCCAGGTATGGACTCCAAAGCACGTTTAG 1047 0.4537 MLRKLLHQSRTFQFHRPISKAYFAAPSPPPCYRSNRLLSSSSSISIDRSGLYNPPDHSHQPTSDSELVNHLKGIIKFRGGPISLGEYMSEVLTNPKSGYYINRDVFGAQGDFITSPEVSQMFGEMIGVWVMCLWEQMGQPQKVNLIELGPGRGTLMADLLRGTSKFRNFIESLHVHLVECSPALQKLQHQNLKCIDEENAAQDTDKRTVSSLVGAPVSWHATLEQVPSGLPTIIIAHEFFDALPVHQFQKASRGWCEKMVDVAEDSSFQFVLSPHPTPATLYLLKRCKWAAPEEIAELNQIEVCPKAMELTQTIVERISSDGGGALIIDYGLDGVISDSLQVWTPKHV. 349
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca6g00578 348 Pfam Putative S-adenosyl-L-methionine-dependent methyltransferase 125 342 IPR003788 -
Seca6g00578 348 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 77 334 IPR029063 -
Seca6g00578 348 PANTHER UNCHARACTERIZED 39 343 IPR003788 -
Seca6g00578 348 Gene3D - 53 346 IPR038375 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca6g00578 Seca-Chr6 17326434 17330411 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca6g00578 K18164 - gmx:100779358 571.622