Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca6g00566 ATGCTAAATTTTCTTGCACGTCAAGCAGAGTTACTCCTCCTATTGACAAGAACTGTCTCCAAAAGCCTATCCTTATCTGTATCTCTACTTGTTTTGAAATGTGCAAGTTCAGGTCTTAAACTATTGAGTGAACTTAAGCTGTTACCTTCTGAGGCTAATTTGATCATAAAACTATTACTCACATTGCTGCTTTCAGTACTTCAGTCCAACTCCCTCCATTCACATTCAGGTGGGGGAACAGATGAGAGTTCTGGTGAGGATTTCTCAAAGGTTTCAAATGCAACCCTAGGCCTACTACCCATTCTTTGCAGCTGCATTGCGACTTCTGAGCATTGCATGCTGTCCCTGTCAGTCATGGACTTGATACTGAGAAGCTTCCTGATGCCCAGGACTTGGTTACCTGTCCTGCAGAATCATCTTCAATTGCAGTTTGTTATGCTAAAACTCCAAGATAAAAATCCTTCTTCCATTCCAATAATTTTGAAGTTCTTTTTGACCCTTGCACGGGTTAGAGGAGGTGCTGAGATGCTTTATTGTTCTGGCTTCTTGTCATCTTTGAGAGTGCTGTTTGCTGAATCTGGTGAGGCTTTCTCAAGAATTGGTAGTGAGAATCCGGGCAGCTCACATGAAAAGTTTGAAATACCTCGAGACATTTGGGGACTTGGATTAGCTGTGGTTACTGCTATGGTTCAATCCTTGGGAGACAGTTCTTCTGGCACTGCTATTGTGGACAGCATGTTGCCTTACTTTTTTTCAGAGAAAGCTCATCTTATTTTTTATTCTCTAAATGCCCCAGACCTCCCTTCTGATGATCATGACAAGAAAAGACCTCGGGCTCAGAGGTCATGGATTTCTTTTGCTATTCTTAAAGAAACAGAACATACTTTGATGCTCATGTGTGAGCTAGCAAAACATTGGAATTCATGGATTAAGGCAATAAAAAATGTAGATAGACAGCTTAGAGAGAAGTGTATCCATCTTTTAGCCTTCATTAGCAGGGGAACTCAACGCCTTGGTGAATCATCAAGCAGAAATGCTCCTCTCATATGTCCACCTACTGTTAAAGAGGAATTTGAATTTTGCTCAAAACCTTCATTTATCAATAGCAAAAATGGATGGTTTGCTCTTTCACCACTTGGATGTGTGCCAAAACCGAAGATCTCTTCTTTCTCAACTGCATTATCTATCTATGGTCAAGCAGCTGAGAGTACTGATCCTGTTCCAAAATCATTTTTCTCTGACACTGTTGCAGTGCAGGGTGCTGCTAGAAGGGCTGAGGAGGTTGGATTTGTTGATCTTGCACATTTTCCTGAGCTTCCAATGCCAGAAATTTTGCATGGACTGCAGGATCAAGCAATTTCCATTGTTACGGAGCTCTGTCAAGCCACCAAACTGAGGGAATCTCCAGAAACACAGAATGTTTGCAACTTAATGTTGCAAATACTTGAAATGGCCTTGCACTTGGAACTTTGTGTTCTACAAATTTGTGGCATTAGACCTGTATTAGGGCGTGTGGAGGACTTCTCAAAGGAAGCCAGAGCTTTATTTAGTGCATTGGAGGTCCATGCTTTTCTAAAAGCATCTTGCAAGTCTTTAAAACAGATGATATCATGTATCTATCCTGGATTACTGCAAGCAGAGAATTTGATATGA 1653 0.412 MLNFLARQAELLLLLTRTVSKSLSLSVSLLVLKCASSGLKLLSELKLLPSEANLIIKLLLTLLLSVLQSNSLHSHSGGGTDESSGEDFSKVSNATLGLLPILCSCIATSEHCMLSLSVMDLILRSFLMPRTWLPVLQNHLQLQFVMLKLQDKNPSSIPIILKFFLTLARVRGGAEMLYCSGFLSSLRVLFAESGEAFSRIGSENPGSSHEKFEIPRDIWGLGLAVVTAMVQSLGDSSSGTAIVDSMLPYFFSEKAHLIFYSLNAPDLPSDDHDKKRPRAQRSWISFAILKETEHTLMLMCELAKHWNSWIKAIKNVDRQLREKCIHLLAFISRGTQRLGESSSRNAPLICPPTVKEEFEFCSKPSFINSKNGWFALSPLGCVPKPKISSFSTALSIYGQAAESTDPVPKSFFSDTVAVQGAARRAEEVGFVDLAHFPELPMPEILHGLQDQAISIVTELCQATKLRESPETQNVCNLMLQILEMALHLELCVLQICGIRPVLGRVEDFSKEARALFSALEVHAFLKASCKSLKQMISCIYPGLLQAENLI. 551
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca6g00566 550 PANTHER NUCLEOPORIN NUP188 HOMOLOG 1 545 IPR044840 GO:0017056
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca6g00566 Seca-Chr6 16744181 16746733 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca6g00566 K14311 - gmx:100796560 869.381
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Seca6g00566 6 16744181 16746733 Seca6g00566 6 16744181 16746733 ECH