Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca6g00544 ATGAATAAATGTGGTTCTTTCTGTTTGCTAGTTGCTAGGTGCCAATCAGATGAAGCTGTGGAGACCACTGAAGAAGCGAGTGACATTGGCATCGTTGGGGATGATGTCCAAGACTTTGGTGATGGGACCTTTGCTTCTGCTCCGGGAATTGATACCATAAGTGTATTTCCAAAAAATAGCGCAAGATTGGTAACAGCTGGAGAAGAGACAGAGCTTCTTGTCGGTGTGAAAAATGATGGGGAGTCGAGCTTGAATGTTGTTGCAATCAGGGCTAGTGTTCACCTTCCCTTTGATCATCGCCTACTCGTTCAAAATCTTACTGCTCAGGTTTTCAACAATGGTTCTGTACCAGCCTCAGCACAGGCTACTTTCCCATATATATTTGCAGTCAGTAAGTTCTTGCAGCCTGGAACTTTTGATCTTGTGGGCACTATTATATATGAGATAGAAGAACATCCATACCAAAGCACCTTCTATAATGGCACTATTGAAGTTGCTGAAGCGAGTGGGTTTCTTAGCATGGAATCTGTTTTTCTTGTTACTCTTGGAGTTGCCCTCCTTGTCCTCCTGGGGCTATGGATTCATGGTCAAATACAAAACCTATCTAAGAAAACAAAGAGGGCTCCAAAAGTTGAAGTTGGGACTAGGTCTGTAGATGCTTCAACAGATGAATGGCTACAGGTCTGGAACTGCATATACTCAGTCTCTGTCAAGCAAATCAAAGAAGAAGAAGTAGATAAATAA 744 0.4261 MNKCGSFCLLVARCQSDEAVETTEEASDIGIVGDDVQDFGDGTFASAPGIDTISVFPKNSARLVTAGEETELLVGVKNDGESSLNVVAIRASVHLPFDHRLLVQNLTAQVFNNGSVPASAQATFPYIFAVSKFLQPGTFDLVGTIIYEIEEHPYQSTFYNGTIEVAEASGFLSMESVFLVTLGVALLVLLGLWIHGQIQNLSKKTKRAPKVEVGTRSVDASTDEWLQVWNCIYSVSVKQIKEEEVDK. 248
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca6g00544 247 Pfam Translocon-associated protein (TRAP), alpha subunit 20 226 IPR005595 GO:0005789
Seca6g00544 247 PANTHER TRANSLOCON-ASSOCIATED PROTEIN, ALPHA SUBUNIT 9 228 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca6g00544 Seca-Chr6 16436485 16439279 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca6g00544 K13249 - gmx:100777232 364.77
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Seca6g00544 6 16436485 16439279 Seca6g00544 6 16436485 16439279 ECH