Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca6g00519 ATGAAGCTGATCAATGAACCGCCACAACTTGGTGCTTTTCTGAGCTTCTGCTCAATAATATTGCTGCTTTTGAACGACGTTGTTCACGTTGCTGCGGAGGACCCTTATAGATTCTTTGATTGGACCATTACCTATGGTGACATTTATCCTCTCGGTGTTAAACAACAGGGTATTCTTATCAATGGACAATTTCCAGGCCCTGAAATATACTCTGTTACCAATGACAATTTGATCATCAATGTGCATAATAACTTGAACGAACCGTTTCTTCTATCATGGGACGGTGTTCAGCAAAGAAGAAATTCTTATCAAGATGGAGTTTATGGAACCACATGCCCAATTCCACCTGGCAAGAACTTCACTTACACACTTCAAGTCAAAGATCAAATTGGAAGCTTTTTCTATTTCCCATCTCTTGCTTTCCATAAGGCAGCTGGTGGCTTTGGGGCCATCAAAATCCTTAGCAGGCCAAGGATTCCTGTCCCATTCCCAGACCCAGCTGGTGATTTCAGCCTCCTTATTGGAGATTGGTACCAAATCAATCACAAGAAGCTGAAGGCTGTTCTAGATTTTGGACATAGACTCCCATTCCCCCAAGGTGTTCTTATCAATGGTCGTGCAATGTTTATTTTACCATCATTTAAATGGACAACAGGGAAAACATACAGGCTTAGAATATCAAATGTTGGACTTCAAAACACACTCAACTTCAGGATTCAAGGCCACACCATGAAATTAGTGGAAGTTGAGGGAACTCACACTGTGCAGACCACTTATTCCTCAATAGATGTTCATGTGGGACAGTCTTATTCTGTGCTTATCACAGCTGATCAAGCACCTAAGGACTACTACATTGCTGTTTCCACTCGTTTCACTAACAGGGTCCTCACAAGCACTGGAATCCTTCACTATAGCAACTCACAGCAACCAGTTTCAGGCCCAATTCCTGGTGGACCAACCACTCAAATTAATTGGTCCATTGAACAAGCTCGTTCAATCAGGACAAACCTGACTGCAAGTGGACCAAGGCCAAACCCACAAGGCTCTTACCACTATGGTCTCATAAACATCACTAGAACAATTAAGCTAGAGAGTTCAGCAGCACAAGTTAATGGCAAGCAGAGATATGCAATCAACAGTGTTTCCTTCATACGAGCTGATACTCCTCTGAAACTTGCTGATTACTTCAAGATTGGTGGTGTTTTCCAAGTTGGAAGCATCCCTGATAGCCCTTCTGGTAAACCCATGTATCTTGATACCTCAGTCATGGGTGCTGATTTCCGAGCCTTTGTTGAGATCGTGTTTCAGAATCATGAAAACATCATCCAGAGCTATCACATAGATGGATACTCATTTTGGGTTGTAGGAATGGACGGTGGTGAGTGGACACCTGCAAGTCGTAACCAATACAACCTTAGAGATGCAGTATCAAGGTGCACAACACAGGTGTATCCTAAGTCATGGACTGCAATTTATATGGCACTAGACAATGTGGGTATGTGGAATGTGAGGAGTGAATTTTGGGCAAGACAGTACCTTGGAGAACAATTCTATCTGAGAGTATATTCACCAGTTGAATCCATCAGGGATGAATATCCAATTCCAAAGAATGCTCTTCTCTGTGGCAAAGCTGCAGGCAGAACAACAAGACCACTATGA 1659 0.4274 MKLINEPPQLGAFLSFCSIILLLLNDVVHVAAEDPYRFFDWTITYGDIYPLGVKQQGILINGQFPGPEIYSVTNDNLIINVHNNLNEPFLLSWDGVQQRRNSYQDGVYGTTCPIPPGKNFTYTLQVKDQIGSFFYFPSLAFHKAAGGFGAIKILSRPRIPVPFPDPAGDFSLLIGDWYQINHKKLKAVLDFGHRLPFPQGVLINGRAMFILPSFKWTTGKTYRLRISNVGLQNTLNFRIQGHTMKLVEVEGTHTVQTTYSSIDVHVGQSYSVLITADQAPKDYYIAVSTRFTNRVLTSTGILHYSNSQQPVSGPIPGGPTTQINWSIEQARSIRTNLTASGPRPNPQGSYHYGLINITRTIKLESSAAQVNGKQRYAINSVSFIRADTPLKLADYFKIGGVFQVGSIPDSPSGKPMYLDTSVMGADFRAFVEIVFQNHENIIQSYHIDGYSFWVVGMDGGEWTPASRNQYNLRDAVSRCTTQVYPKSWTAIYMALDNVGMWNVRSEFWARQYLGEQFYLRVYSPVESIRDEYPIPKNALLCGKAAGRTTRPL. 553
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca6g00519 552 Gene3D - 36 157 IPR008972 -
Seca6g00519 552 Gene3D - 353 548 IPR008972 -
Seca6g00519 552 FunFam Monocopper oxidase-like protein 167 342 - -
Seca6g00519 552 FunFam Monocopper oxidase-like protein 354 550 - -
Seca6g00519 552 CDD CuRO_3_AAO_like_1 385 506 IPR034275 GO:0005507
Seca6g00519 552 Pfam Multicopper oxidase 43 156 IPR011707 GO:0005507
Seca6g00519 552 Pfam Multicopper oxidase 170 306 IPR001117 -
Seca6g00519 552 Pfam Multicopper oxidase 388 523 IPR011706 GO:0005507|GO:0016491
Seca6g00519 552 SUPERFAMILY Cupredoxins 28 183 IPR008972 -
Seca6g00519 552 Gene3D - 167 342 IPR008972 -
Seca6g00519 552 SUPERFAMILY Cupredoxins 354 543 IPR008972 -
Seca6g00519 552 CDD CuRO_1_AAO_like_1 38 153 IPR034273 GO:0005507
Seca6g00519 552 PANTHER MULTI-COPPER OXIDASE 55 516 IPR045087 -
Seca6g00519 552 SUPERFAMILY Cupredoxins 163 344 IPR008972 -
Seca6g00519 552 FunFam L-ascorbate oxidase homolog 36 157 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca6g00519 Seca-Chr6 15633031 15637683 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca6g00519 - - gmx:100793934 996.882
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Seca6g00519 6 15633031 15637683 Seca6g00519 6 15633031 15637683 ECH