Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca6g00518 ATGAGAGGAGGAAGAATGCACAGAAAATCAGACTCTGAGGTAACGAGCAATAGCATGGAACAAACTTCATCGTCGCCGGCGAGGTCTCCTCCCCGGCGGCCACTGTACTACGTTCAGAGTCCTTCGAACCACGACGTTGAGAAAATGTCATACGGTTCAAGTCCTGTTGGTTCTCCACCTCATCACCATTTCCATTACTACCTCTCTTCTCCAATTCACCATTCTCGTGAGTCCTCAACTTCTCGATTCTCCGCTTCTCTCAAAAACCCTCGCAACCTCTCCGCCTGGAAGAAACTCCACCATCAAAACGACGATGACCTCGATCAAGACGACGACGATGACGGTGCCGTTAACGATTCTTCCCGTAACTTCCGATTGTACCTCTGCTTCTTCTTGCTCTTCGTTCTTCTTTTCACGATCTTCTCTTTGATTCTTTGGGGCGCTAGCAAGAGCTACAAGCCTCGAGTCATCGTTAAGAACATAGTGTTTGAGAACTTGAATGTGCAATCGGGGAACGATGCGACGGGGGTACCAACGGATATGCTGTCGTTGAACTCAACGGTGAGGATCTTATACAGAAATCCTGGCACATTCTTCGGCGTTCATGTCACTTCCACCCCTCTTCAACTTAGCTATTACCAACTCACATTAGCTTCTGGCCAGATACAGAAGTTCTATCAATCAAGGAAGAGTCAGCGGAAGCTAGCAGTAGTGGTGTTTGGACATCAGGTTCCACTCTATGGTGGGGTATCAGTTCTTGGGACTACTAAAGAGCACATGGACAGTGTTGCTTTACCACTGAACCTGACATTTGTAGTGAGATCAAGGGCCTTCATCTTGGGAAGATTGGTTAAGTCTAAATTCTACCGAAGAATCAGATGTTCTGTCACTTTGCATGGAAACAAGCTTGGAAAACCTCTTAATTTGACGGATTCATGTGTTTACAAGTGA 951 0.4658 MRGGRMHRKSDSEVTSNSMEQTSSSPARSPPRRPLYYVQSPSNHDVEKMSYGSSPVGSPPHHHFHYYLSSPIHHSRESSTSRFSASLKNPRNLSAWKKLHHQNDDDLDQDDDDDGAVNDSSRNFRLYLCFFLLFVLLFTIFSLILWGASKSYKPRVIVKNIVFENLNVQSGNDATGVPTDMLSLNSTVRILYRNPGTFFGVHVTSTPLQLSYYQLTLASGQIQKFYQSRKSQRKLAVVVFGHQVPLYGGVSVLGTTKEHMDSVALPLNLTFVVRSRAFILGRLVKSKFYRRIRCSVTLHGNKLGKPLNLTDSCVYK. 317
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca6g00518 316 MobiDBLite consensus disorder prediction 15 29 - -
Seca6g00518 316 Pfam Late embryogenesis abundant protein 190 295 IPR004864 -
Seca6g00518 316 MobiDBLite consensus disorder prediction 1 41 - -
Seca6g00518 316 PANTHER LATE EMBRYOGENESIS ABUNDANT (LEA) HYDROXYPROLINE-RICH GLYCOPROTEIN FAMILY 120 301 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca6g00518 Seca-Chr6 15583488 15589334 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca6g00518 - - gmx:100817846 471.855
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Seca6g00518 6 15583488 15589334 Seca6g00518 6 15583488 15589334 ECH