Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca6g00511 ATGATTAGTACCAAGAAAATGATCCAAATAGCTAGAAAGTGGCAGAAACATGCCACAAAGCAAAGGAAGAGAATCCTATGGCGAAAGAGTGATCAAGAAAATGAAGCAAAACAAGAAGGTTATGACAATTTATGTGCGAAGGCAGAGAAGGGTCATTTTGTTGTATACAGCATGGATAAGAGGCGCTTTGTGCTTCCTTTGGTGTATTTGAAAAACAACATCTTCAGAGAGCTCTTCGAATTAGCAGAAGAAGAGTTTGGTTTGTCTTGCAATGTGCCCCTTGTGTTGCCTTGTGATGGCATAGTAATAAAATATGTAATTACGTTGATAGAGGGAAACGTGGCTAAGGATCTGGAGGAAGCAGTGTTAATGTCCATAACTACACGTCGATGTCAATCATATTTGAATCTTCATCAAGAACGAACCAATCAACATATGCTCTGCAGTTTCTGA 453 0.3907 MISTKKMIQIARKWQKHATKQRKRILWRKSDQENEAKQEGYDNLCAKAEKGHFVVYSMDKRRFVLPLVYLKNNIFRELFELAEEEFGLSCNVPLVLPCDGIVIKYVITLIEGNVAKDLEEAVLMSITTRRCQSYLNLHQERTNQHMLCSF. 151
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca6g00511 150 Pfam Auxin responsive protein 12 110 IPR003676 GO:0009733
Seca6g00511 150 PANTHER AUXIN-RESPONSIVE FAMILY PROTEIN 1 144 IPR003676 GO:0009733
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca6g00511 Seca-Chr6 15274419 15274871 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca6g00511 50 118 Calmodulin-binding Proteins AT5G20810 41.429 1.04e-10 55.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca6g00511 - - adu:107477309 184.496
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Seca6g00511 6 15274419 15274871 Seca6g00511 6 15274419 15274871 ECH