Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca6g00503 ATGGAAGAAGAGACAAAAGTCATTTCAGAAGTTTCAGTGACTAAGGTTGTCGAGGAGGCAGATCATAAGGATGATAATGTTAAGGAGACAAATGGAGACTTGCCTAAAGTAACAACCGAAGGAAAGAAAGAAGAGGAAGAGAATGCCTTTGATGGAGAGTTCATTAAAGTTGAGAAGGAGGAGAATGCCTTAGATGATAAGTCCCATGAAACTGAAAGAAGCTCTGATCCACCAAGCAGAGAATTTCTAGAAGCACAAGAGAAGATCCGGGAACTTGAGGTTGAACTACAAAGACTAGCAGAATCTTTAAAGAGCTCTGAACATGAAAATGCTGAGCTGAAGGGAGAGATCTCAGTTACTAAAGAGAAATTGGAGGAAAGTGGAAAGAAATACGAAGAGCTTGAGCTGAGTCACAAGAAATTGCAAGAGCAGATTATTGAAGCTGAGAACAAATACAATCTGCAACTCAGCACTCTTGAAGAGGCAATGCAAAGTCAAGAAGTGAAGCAAAAAGAGCTTCTTAATGTGAAGGAAGCTTTCGATAATATGAACCTTGAGCTTGAAAGCACCACAAAGAGGATGCAGGAGTTGCAGAATGAATTGCAACTTTCTGCAGATGAGGCGCGGAAGTTTGAGGAGCTGCATAAGGAAAGTGGTTTACAAGCTGAATCTGAGGGAAAGAAGGCCTTAGAATTTGAGAGACTACTTGAAGAAGCAAAATTGAGTGCTAGAGGAATGGAAGAGGAGATGGCTTCCTTGAAAGAAGAATTGAAGGAAGTTTATGATAAGATTGCTGAAAATCAAAAGGTTGAAGAAGCACTTAAAACAACTACAGCAGAACTCTCTACTGTCCAAGAGGAGTTGACACTATCAAAATCCCAGCTATTGGAAGTTGAGAAAAGACTCTCTTCAAGGGATTCTTTAGTAGATGAGTTGACCCAAGAATTGAACCTGATAAAGACTTCAGAAACACAGCTAAAGGAAGACATGTCAGCACTTCAAAATCTACTCGCCTCTACAAAGGAAGAACTGCAAGAAAAAGCTTCTGAGTTGGAAACTACAAGGTCCAAGTTGCAGGAGGAGGAAAAGTTGAAGGAATCAATTGAAGTTGCACTCAAGAGTCAAGAAGCACAGTTTCTAGATGTACAAGAGGAATTGAATAAACTTAATACCGAAAAAGCAAGTCTTGAGGCCACGGTGGAAGATCTAACCTCTAATGTGAAACAGTTTAAGGAGCTGTGCACTGATTTAGAGGAAAAGCTAAAGCTTTCAGATGAAAATTTTCAGAAAACAGATTCTCTTTTATCTCAGGCACTTTCAAACAATTCAGAGCTTGAGCAGAAGATAAAGTCTTTGGAAGATCTCCATACTGAAGCTGGAGCTGCTGCAGCTACTGCTAGTCAAAGGAATGTTGAGCTCGAGGGACATGTTCAGGCTTCAAATGCAGCTGCAGAAGAGGCAAAATCACAAATGAGGGAGCTTGAAACACGCTTCATAGCAGCAGAACAAAGGAGTGTGGAGCTTGAGCAACAATTGAATTTATTACAATTGAAAACCAATGATTCTGAGAGAGAAGTGGCGGAATTCTCAGAGAAAATATCTCATCTCGATGCTAAATTGAAAGATGCTGAGGAAGAGAAGAATCTTCTTAATCAACAACTGCAGGAGCACATGGAAAAGGTAGTTCAACTTGAATCTGATTTAAGTCAATCATCTAGTCGGAATTCACAATTAGAGGAGGAGCTGAAGATAGTCAATGACAAATGTTCTGAGCATGAAGACCTAGCCACTATGAACCATCAGCGTAGCCAAGAACTAGAAGATTTAATCCAGAGCTCTCATTCCAAATTGGAAGATACTCAAAAGAAAGCGAGTGAGTTGGAGTTGTTACTTGAAACGGAGAAATACAGAATTCAGGAACTTGAACAACAGATAAGCACATTAGAAAAGAAATGCAGTGAATCAGAAGCAGATGCCAAGAAAGCCCTTGACAATGTGTCTTATCTGACATCAGAACTTGAAGCATTTCAAGCACGAGCCTCAAGCCTTGAAATTGTAGTGCAAGAAGGTGTTGAAAAGGAAAAGAAGTTAGAAGATTCTTTGATTGCTGTGACAGATGAAAAGAAAAGGTTAGAAGATGCTTCAAACAGTTTGAATGAGAAGCTTGCTGAGGCAGAAAACCTATTGGAGATTGTGAGAAATGATTTGAATCTTACACAAGCTAAGTTGCAAAGCACTGAAAGTGATCTCAAGGCTGCTGAATTAAGAGAGAGTGAGATAATGGAAAAACTTCAAGTTTCTGAAGAAAATCTTGTCGTACGAGGAAGAGATATAGAGCTGACTTCTGCAAGAAACTCAGAACTCCAATTGTTACATGAATCTCTCACAAGAGATTCTGAACAGAAACTCCAAGAAGCTTTAGAGAAATTCAGCAGCAAGGATTCTGAGGTTCAATCTCTGCTTGAGAAAATCAAGATTTTGGAGGAACAAATGGCTGGAGCCAAGGAACAGTCTACATCTTTGAAGAATGAATTTGAAGAGAGTCTGAGCAAAGTGGCTTCCTTGGAAAGTGCAAATGAAGATTTAAAAAGGCAAATTATAGAAGCTGATAACAAGAGTTCTCAGTCTTTTTCAGAGAATGAGTTATTGGTTGGAACAAACATTCAACTCAAAACCAAGATTGATGAACTTCATGAATCATTGAACATTGCTCTATCAGAGAAGGAAGCCACTGCTCAAGAACTTGTGTCTCATAAGAACACTATAGCTGAATTAAATGATCTACAATCAAAATCCTCTGAAATTCAATGTGCAAATGAAGCTCGCATTCTGGAAATAGAATCAGAATTACAAGAAGCATTGAAGAGGCATACTGAAAAGGAATCAGAAACCAAAGAATTGAATGAGAAGCTGAGTACACTAGAAGGCCAAATAAAGCTATATGAAGAACAGGCACGTGAAGCAGTTGCAAATTCTGAAACTCATAAAGCTGAGCTGGAGGAGAGACTCCTAAAATTGAAGCATCTTGAAACGGTTATTGAGGAACTTCAAAACAAGTCACTCCACCATGAAAAGGAAACTGCAGGACTAAATGACGAAAAAACAAAGCTTAATCAGGAAATAACCATCTATGAATCCAAATTAAGTGATTTACAGTCAAAGCTCTCTGCAGCACTTGTTGAGAAGGATGAGACAGTTAAAGAGATACTCACCTCAAAGAATGCCATTGAAGAGTTATTGACAAAGCATAGTGCAGAAGCGGAGACATTAAAGTCACAGATATCTTCAGTAACAGATGAGAAGAACTTGCTCAATGAGACTAATCAGAATATAAAGAAGGAACTCCAGTCAGTGATATTTGACCTTGAAGAGAAGTTGAAGGAACAACAGAAAAATGAAGACTCTCTGAGATCTGAGATTGAAACTCTCAAAGTTGAGATTGCTGAGAAATCTGAATTGCAAAGTCGGCTCAAGGAAATTGAAGAGCAACTGATAAAAGCTGAATCTAGACTAAATGAAGAGGTTGGAAGCATTCAAGCTGCTGCTTCTCAAAGAGAAGCAGAATTAAATTCAAAATTGGAGGATTATGCACAAAAAGTCAATGATATAAATGTGTTGAATGGAAAGGTTTCAGAACTTGAGAAAGAGTTACAACTTGCACAGGCTACTATTGCTAACCAGAAAGGAACAGAATCTCAGAAGTTGGAACTTGAGGCAACCCTGAAGAATTCTCTTGAAGAACTTGAAACTAAGAAAAAGGAAATCTCTCTTCTACAGAAACAAGTGATAGATTTAGAGCAGAAATTGCAACTGGCTGGTGATAAATTATCAGCTAAGGTAATTCTCCTCCCAAAATTTTCCAACCATGTGTGTTTGTGTATGAACAGATGGAAAACATTCCTCCTTGTTCTTGGATTATATTTCCTTGCAATTTTAAAATCAGAAATGCAAAGATTTACATTCATTTCAATTTCCAAAGTAATATTCTTTTTTCCTTTTTTTGGGGATGAGGGGCCAAAGAATGACTTTTGGGTGATGCTTGGAAAATATTGTGTACTTTTGTGGAAATATAATTATGATTAG 4083 0.3826 MEEETKVISEVSVTKVVEEADHKDDNVKETNGDLPKVTTEGKKEEEENAFDGEFIKVEKEENALDDKSHETERSSDPPSREFLEAQEKIRELEVELQRLAESLKSSEHENAELKGEISVTKEKLEESGKKYEELELSHKKLQEQIIEAENKYNLQLSTLEEAMQSQEVKQKELLNVKEAFDNMNLELESTTKRMQELQNELQLSADEARKFEELHKESGLQAESEGKKALEFERLLEEAKLSARGMEEEMASLKEELKEVYDKIAENQKVEEALKTTTAELSTVQEELTLSKSQLLEVEKRLSSRDSLVDELTQELNLIKTSETQLKEDMSALQNLLASTKEELQEKASELETTRSKLQEEEKLKESIEVALKSQEAQFLDVQEELNKLNTEKASLEATVEDLTSNVKQFKELCTDLEEKLKLSDENFQKTDSLLSQALSNNSELEQKIKSLEDLHTEAGAAAATASQRNVELEGHVQASNAAAEEAKSQMRELETRFIAAEQRSVELEQQLNLLQLKTNDSEREVAEFSEKISHLDAKLKDAEEEKNLLNQQLQEHMEKVVQLESDLSQSSSRNSQLEEELKIVNDKCSEHEDLATMNHQRSQELEDLIQSSHSKLEDTQKKASELELLLETEKYRIQELEQQISTLEKKCSESEADAKKALDNVSYLTSELEAFQARASSLEIVVQEGVEKEKKLEDSLIAVTDEKKRLEDASNSLNEKLAEAENLLEIVRNDLNLTQAKLQSTESDLKAAELRESEIMEKLQVSEENLVVRGRDIELTSARNSELQLLHESLTRDSEQKLQEALEKFSSKDSEVQSLLEKIKILEEQMAGAKEQSTSLKNEFEESLSKVASLESANEDLKRQIIEADNKSSQSFSENELLVGTNIQLKTKIDELHESLNIALSEKEATAQELVSHKNTIAELNDLQSKSSEIQCANEARILEIESELQEALKRHTEKESETKELNEKLSTLEGQIKLYEEQAREAVANSETHKAELEERLLKLKHLETVIEELQNKSLHHEKETAGLNDEKTKLNQEITIYESKLSDLQSKLSAALVEKDETVKEILTSKNAIEELLTKHSAEAETLKSQISSVTDEKNLLNETNQNIKKELQSVIFDLEEKLKEQQKNEDSLRSEIETLKVEIAEKSELQSRLKEIEEQLIKAESRLNEEVGSIQAAASQREAELNSKLEDYAQKVNDINVLNGKVSELEKELQLAQATIANQKGTESQKLELEATLKNSLEELETKKKEISLLQKQVIDLEQKLQLAGDKLSAKVILLPKFSNHVCLCMNRWKTFLLVLGLYFLAILKSEMQRFTFISISKVIFFFPFFGDEGPKNDFWVMLGKYCVLLWKYNYD. 1361
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca6g00503 1360 MobiDBLite consensus disorder prediction 17 85 - -
Seca6g00503 1360 Coils Coil 309 427 - -
Seca6g00503 1360 Coils Coil 810 875 - -
Seca6g00503 1360 SUPERFAMILY Tropomyosin 221 444 - -
Seca6g00503 1360 Coils Coil 477 595 - -
Seca6g00503 1360 Coils Coil 229 287 - -
Seca6g00503 1360 Coils Coil 943 1054 - -
Seca6g00503 1360 SUPERFAMILY Tropomyosin 409 624 - -
Seca6g00503 1360 Coils Coil 1073 1177 - -
Seca6g00503 1360 Coils Coil 1196 1230 - -
Seca6g00503 1360 Coils Coil 908 928 - -
Seca6g00503 1360 SUPERFAMILY Tropomyosin 608 851 - -
Seca6g00503 1360 Coils Coil 603 665 - -
Seca6g00503 1360 Coils Coil 694 770 - -
Seca6g00503 1360 Coils Coil 1234 1275 - -
Seca6g00503 1360 Coils Coil 435 462 - -
Seca6g00503 1360 PANTHER EARLY ENDOSOME ANTIGEN 1 1279 - -
Seca6g00503 1360 Coils Coil 82 176 - -
Seca6g00503 1360 Coils Coil 180 214 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca6g00503 Seca-Chr6 14996562 15005487 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca6g00503 - - gmx:100801514 1882.84