Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca6g00498 ATGGTGAGGAAACATGGCTGGCAGTTACCTGCTCACACTTTTCAGGTTGTTGCAATCACTGTATTTTGCTTGTTGGTGATTGCTTTCTATGCTTTCCTTGCACCCTTCATTGGAGGTCATATATGGGAATACACCTTCATTGGCATTTACTCTCCTGTGGCACTCACTGTTTTCATTCTCTACGTCAGATGTACTGCAATTAACCCTGCAGATCCAGGCATTATGTCTAAATTTGACCCCAGAGTGGGAAATAATTTCAATTCTGCCCCTGATTTATTGGGCAAGCATCAAGCTTCTGAACGTGAAGGCATTGCTGCAGGGGAGCATTCTTCTCCGTCATCTGCTGCTTCCAAAAGGTCTATGACAAATATGAGCAAGAAAAGCTCAGTGGAAGATCTTGAAAGAATAGATAATTCAAGAAATCAGATTAACCACAACTCGTGTGATGTAATTGGAGGAATTTTCTGCATATTATTTTCACATGAAGATTGCCGGAAACAAGAAGCAACTACTGATGAGCAGGGTGGTGGAGAAGATGCACTGTTCTGCACTTTATGCAACGCTGAGGTGCGCAAGTTCAGTAAACATTGTAGAAGTTGTGATAAATGTGTTGATGGCTTCGATCATCATTGTCGGTGGCTTAACAACTGTGTGGGTCAAAAAAATTACAGTTCTTTTATTGTTCTCATGGCCTTTAGTCTTGCATGGCTTGTTATTGAAGCTGGAGTGGGTATTGCTGTTTTAGTGCGTTTCTTTGTTAACAAGAGAGGAATGGAATCTGAAATCATTGATAGACTTGGAAATGGATTCTCTCGCCCCCCATTTGCAGTAGTTGTGGCTGTATGTACTGCAGTTTCTGTCTTGGCTTGTGTGCCTTTGAGTGAGCTTTTCTTTTTCCACATGATACTAATCAGGAAGGTCAGTGATTCAGTAGCTGAGAATCTGAGGAGTTATATTCTCATCTGCCTTCCTTTCTTCCTATTGCATCAGGGCATCACAACCTATGAATATGTTGTAGCAATGAGAGCCATGAGTGAAGCACCTGCAGGGGCATCTGTGGATGAGGATTTGCCAAATATACTCTACTCTCCAACAGGCTCAGCCACAACTGGATTGAGTGGAGGAAGTTCTCTTGGTTTGCAGTATAAAGGGGCCTGGTGTACCCCACCTAGGGTATTCGTGGATTATCAGGATGAAGTTGTGCCTCACTTGGAGCCTGGAATGCTACCATCAACTGTTGATCCAGATGCAGCTGGGAGTGCAGAAAGAGGCCAAAAGATGCCAAAAAGGCCTGTTCGTATTAGTGCCTGGAAGCTTGCTAAGTTGGACTCACAAGAGGCGATGAAAGCAGCTGCAAAAGCCAGGGCATCTTCCTCAGTCTTACGACCTGTAGATAACCACCGTCTACCCGATGCAGAATTAAGCTCTAGTGGCAACATGAGCATCAGAAGTAGTTTGAGCACAGAGACTGGAACTAATAAGGAAATAAAATATGAGTTGAGATTGTCTCCAGTGAGGAATTCTATTGCTCCTAGTCAAGGAAGTCGTGATGAGTATGAAACTGGAACTCAAAGCATGAGCAGTTTCAGTAGTCCAAGCCATGTTCAAGAGGCAGTTACACTTAGCCCTCTTCCACAGGGACTCAGTTCGGGTGGCTTCCGGGCAGGTACCTCAATTCCTGGTTTAGTGCCTGAGCGTCCTTTAACTTCTAAAGCAACATTGTCAAACTTCAGGAACCCAATATCTAACCCTTCTCTTGGGTTTGATGGAAGAGCAATGCCAAAGGGAATAGGTAATGATCCGTTATTGCTTTCAGCTTCTAGCACGTCTATTCTAAGAGATGTGAAACGGACATCAGTTGTTTGGGATCAAGAAGCTGGCAGATATGTATCAGTTCCTTTATTGCCCTCAGAAGCTCGAAATAGGTCATCCATGCGAATAGAATTGCCAAATTCAAATGCTGAAACAAGCAGCATTGGAAGAAAACCAGTTATTCCTCTGCAGGAGTCATCATCATCTGCACCTAAGTCTCCAGGGCAGCATGCACAGAATCTGATGTATACAGGAGATTCTATCTTTTTTGGTGGTCCATTTTTGAGTGTCCCTGCTAAGGATGGTTCGAAAAATGAAAGACATATGGGGTCAGGGGAGGCCCAAGATAGCATAGCAGTAAACTTGCCGCAAGAGCCAAGATATAAAAGGGATTCACTTTCAAATCAGCTTCCAGTGTTTGTTCCAGGTGGTTTTGAGAATACTCTTCAACCTCGGTCTTAA 2274 0.4367 MVRKHGWQLPAHTFQVVAITVFCLLVIAFYAFLAPFIGGHIWEYTFIGIYSPVALTVFILYVRCTAINPADPGIMSKFDPRVGNNFNSAPDLLGKHQASEREGIAAGEHSSPSSAASKRSMTNMSKKSSVEDLERIDNSRNQINHNSCDVIGGIFCILFSHEDCRKQEATTDEQGGGEDALFCTLCNAEVRKFSKHCRSCDKCVDGFDHHCRWLNNCVGQKNYSSFIVLMAFSLAWLVIEAGVGIAVLVRFFVNKRGMESEIIDRLGNGFSRPPFAVVVAVCTAVSVLACVPLSELFFFHMILIRKVSDSVAENLRSYILICLPFFLLHQGITTYEYVVAMRAMSEAPAGASVDEDLPNILYSPTGSATTGLSGGSSLGLQYKGAWCTPPRVFVDYQDEVVPHLEPGMLPSTVDPDAAGSAERGQKMPKRPVRISAWKLAKLDSQEAMKAAAKARASSSVLRPVDNHRLPDAELSSSGNMSIRSSLSTETGTNKEIKYELRLSPVRNSIAPSQGSRDEYETGTQSMSSFSSPSHVQEAVTLSPLPQGLSSGGFRAGTSIPGLVPERPLTSKATLSNFRNPISNPSLGFDGRAMPKGIGNDPLLLSASSTSILRDVKRTSVVWDQEAGRYVSVPLLPSEARNRSSMRIELPNSNAETSSIGRKPVIPLQESSSSAPKSPGQHAQNLMYTGDSIFFGGPFLSVPAKDGSKNERHMGSGEAQDSIAVNLPQEPRYKRDSLSNQLPVFVPGGFENTLQPRS. 758
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca6g00498 757 ProSiteProfiles DHHC domain profile. 181 231 - -
Seca6g00498 757 MobiDBLite consensus disorder prediction 468 492 - -
Seca6g00498 757 Pfam DHHC palmitoyltransferase 180 306 IPR001594 GO:0016409
Seca6g00498 757 MobiDBLite consensus disorder prediction 406 430 - -
Seca6g00498 757 MobiDBLite consensus disorder prediction 110 127 - -
Seca6g00498 757 MobiDBLite consensus disorder prediction 507 531 - -
Seca6g00498 757 MobiDBLite consensus disorder prediction 472 492 - -
Seca6g00498 757 MobiDBLite consensus disorder prediction 103 131 - -
Seca6g00498 757 PANTHER ZINC FINGER DHHC DOMAIN CONTAINING PROTEIN 22 307 - -
Seca6g00498 757 MobiDBLite consensus disorder prediction 703 727 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca6g00498 Seca-Chr6 14855389 14864083 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca6g00498 182 225 Lipid Metabolism Gene Families AT4G22750 45.455 8.69e-08 52.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca6g00498 K20027 - gmx:100805779 1276.54