Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca6g00491 ATGGCAACTACTAGCACTTGGTTGACCTTGGCAATGTTGGTGGTTTGTGGATCTTTGATATATAACACAAATCAAGTTTCAGGTCAATGTGGAGGAAGCCTTCCAGCCCTTATATCTCAGTGTTCACAGTTTGTGCAGAAGCCTGGACCAATGATTCCGCCATCACCAGGGTGCTGTGCTGAGTTGAGACACTTTGATATCCCATGCGCATGCAAGCTTGTTACTAAAAGTGTTGAAAAGTACGTGAGTATTCCCAAGGTAATATTTGTTGCACGGTCTTGTGGATTGAACCTTCCACCGGGAATGCAATGTGGATCTGTTAGAGTGCCACCGAAAGCCATGAAGTGA 348 0.4511 MATTSTWLTLAMLVVCGSLIYNTNQVSGQCGGSLPALISQCSQFVQKPGPMIPPSPGCCAELRHFDIPCACKLVTKSVEKYVSIPKVIFVARSCGLNLPPGMQCGSVRVPPKAMK. 116
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca6g00491 115 SMART aai_6 41 104 IPR016140 -
Seca6g00491 115 CDD nsLTP_like 30 100 IPR044741 -
Seca6g00491 115 PANTHER BIFUNCTIONAL INHIBITOR/LIPID-TRANSFER PROTEIN/SEED STORAGE 2S ALBUMIN SUPERFAMILY PROTEIN 9 112 - -
Seca6g00491 115 Gene3D - 27 102 IPR036312 -
Seca6g00491 115 Pfam Probable lipid transfer 11 104 IPR016140 -
Seca6g00491 115 SUPERFAMILY Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin 37 104 IPR036312 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca6g00491 Seca-Chr6 14559119 14561603 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca6g00491 1 110 Acyl Lipid Metabolism Gene Families AT4G33550 38.393 2.63e-24 87.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca6g00491 - - cam:101501404 186.037