Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Seca6g00452 ATGGTCGTGCCGCTTCTTGCTTTGATTGTTGTTGCAGCTTTCGTTCCTAATGGAGTGTTGGCAATTCCCTCTACCGTCCCCGCATTCCTTTGGTCATCCCATTATAACCCTTCAGCAAATCAGCAAATAGATTATATCTTTCTGGACCATTGCAGGGTTTCTGACAATGGATTGAAGGAATCTGTAAATTATCAGGTCATTTCTCCAAAAGATCTAGCAAAGTCTGTTTCAGCAGAAGCAGGCTGGTCAAATTTTCTGTGCAAAGGAAAGAAATTTCAAGAGCCTCTTGATCTGGCACTTCTATTCATTGGTAGAGAGTTACAATCTTCAGATTTAAGCGTGAACAAGCATGCAGACTCGGCTCTCTTAGACTTGCTCAAGGTCTCTTTCGTCAGATCCAACACTTCCATCGCATTTCCCTATGTTTCTGCGCCAGAGGATGTGAATTTGGAAGACTCGTTGGTTTCAGGATTTGCTGAAGCCTGTGGAGATGATTTAGGAATTGGCAATATTGCTTTCCTTGGATCTTGCTCCATGGACAATAAAAATCATGAAGAAACTGCAGCTTCACACTCAGTTCAAGACTATTTGACCAAGAGGATGGAAGAGAGTCACAGAGGGAAAACAGATTTGGTTGTGTTCTGCAATGGACACTCTCAAGCTTCAAAAAATGTTGACAAAACACAATCTGAAGGTGAAGTTTTATCTGAGCTGATCAGTTCTGTGGAGGAATCTGGGGCAAAATATGCAGTTCTTTATGTGTCAGATCCCTCAAGGTCAATCCAGTATCCTTCTTACAGGGATCTGCAAAGGTTTCTAGCAGAAAGTACAACTGGGAATAAATCGACCAATTTCACACTTTGTGATCCAGTCTGCCAGATTGCATCATCCCTTTTCGAGGGAATTATAGTGGGTATAGTTTTGTTAATAATTTTGATATCGGGGCTTTGCTGCATGATGGGAATTGACACCCCAACAAGATTTGAGACGCCTCAAGAGTCATGA 1005 0.4199 MVVPLLALIVVAAFVPNGVLAIPSTVPAFLWSSHYNPSANQQIDYIFLDHCRVSDNGLKESVNYQVISPKDLAKSVSAEAGWSNFLCKGKKFQEPLDLALLFIGRELQSSDLSVNKHADSALLDLLKVSFVRSNTSIAFPYVSAPEDVNLEDSLVSGFAEACGDDLGIGNIAFLGSCSMDNKNHEETAASHSVQDYLTKRMEESHRGKTDLVVFCNGHSQASKNVDKTQSEGEVLSELISSVEESGAKYAVLYVSDPSRSIQYPSYRDLQRFLAESTTGNKSTNFTLCDPVCQIASSLFEGIIVGIVLLIILISGLCCMMGIDTPTRFETPQES. 335
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Seca6g00452 334 Pfam V0 complex accessory subunit Ac45/VOA1 transmembrane domain 298 329 IPR046756 -
Seca6g00452 334 PANTHER 2-C-METHYL-D-ERYTHRITOL 4-PHOSPHATE CYTIDYLYLTRANSFERASE 2 334 - -
       

Duplication type information


Select Gene Chromosome Start End Duplicated_type
Seca6g00452 Seca-Chr6 13552486 13557315 Wgd
       

Pathway information


Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca6g00452 - - gmx:100808749 485.337